Gene PputGB1_3096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3096 
Symbol 
ID5870881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3461790 
End bp3462167 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content63% 
IMG OID641548212 
Productglycine cleavage system protein H 
Protein accessionYP_001669324 
Protein GI167034093 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0509] Glycine cleavage system H protein (lipoate-binding) 
TIGRFAM ID[TIGR00527] glycine cleavage system H protein 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTC TGCGTTTTAC CCCCGAACAC GAATGGCTGC GCCTGGAGGC GACTGGCGAG 
TTGACCGTCG GTATTACCAG CTATGCCCAG GCGGCATTGG GGGACGTGGT GTACGTACAG
CTGCCGGAGC CGGGTGCGTA TGGCGAGGGC AATGAAGTCG CGGTGCTCGA GTCGGTGAAG
GCCGCCAGCA ACATCACCAT GCCTTTGACC GGCACCGTGG TGGCCGTCAA CCAGGCGCTG
GCCGACGACC CAGAGCTGGT CAACGCCTCG CCAATGCAGG ACGGCTGGTT CTTCCGCATC
CAGGCCAGCA ACCCTGGCGA CCTCGATAGC CTGATGGACC AGGACGGCTA TGACCGTTTC
CTGGCCGAAA ACGCCTGA
 
Protein sequence
MSTLRFTPEH EWLRLEATGE LTVGITSYAQ AALGDVVYVQ LPEPGAYGEG NEVAVLESVK 
AASNITMPLT GTVVAVNQAL ADDPELVNAS PMQDGWFFRI QASNPGDLDS LMDQDGYDRF
LAENA