| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3078 |
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| Symbol | |
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| ID | 5870863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3443255 |
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| End bp | 3444538 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641548194 |
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| Product | arsenical pump membrane protein |
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| Protein accession | YP_001669306 |
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| Protein GI | 167034075 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
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| TIGRFAM ID | [TIGR00935] arsenical pump membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.144685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGTCG CCATTGCTGT CTTCGTCCTC ACCCTCACCC TCGTCATCTG GCAGCCAAAG
GGGCTTGGCG TCGGCTGGAG TGCCGCGCTG GGTGCCGTCA TTGCCTTGCT GGCTGGCGCG
GTTTCCCTGC ACGATATCCC CACCGTGTGG GCCATTGTCT GGAACGCTAC CGCCACCTTC
ATCGCCGTCA TCATCATCAG CCTGCTGCTC GATGAAGCCG GCTTCTTCGA ATGGGCCGCG
CTGCACGTTG CGCGCTGGGC AAACGGCAGC GGCTATCGCC TGTTCGCCTT CAGCGTGTTG
CTCGGCGCCG CCGTGTCGGC GCTGTTTGCC AACGATGGCG CGGCGCTGAT TCTTACGCCA
ATCGTCATGT CGATGCTGCT CGCATTGCGC TTCTCGCCTG CTGCGACACT GGCCTTTGTC
ATGGCTGCGG GCTTTATTGC CGACACGGCG AGCCTGCCGC TGGTGGTCTC CAACCTGGTC
AACATCGTCT CGGCCGATTA CTTCGGCCTG GGTTTCACCG AATATGCCTC GGTAATGGTG
CCGGTGAATA TCGCCAGCGT GGCAGCCACC CTGGTGGTGC TTTATCTGTT TTTCCGCCGT
GACATCCCAA GGCGGTATGC ACTCGATGCG CTGAAGAAAC CGAGCGAGGC GATTGTCGAC
CGCGCCACCT TCAAAGTCGG AATGTGGGTA CTGGTGGCAC TGCTTACAGG CCTGTTTGCC
TTGGAGCCGT TGGGTATCCC GATCAGTGCG GTGGCCGCAG CCTGTGCCGC CGCTCTGTTC
GCCGTCGCTG CTTACGGTCA CCGTATTTCA ACGCGTCGCG TGCTGCGAGA GGCCCCGTGG
CAGGTGGTGA TCTTCTCGCT CGGGATGTAT CTGGTGGTGT ATGGCCTGAA AAACGCCGGC
CTCACCGACA TGCTCACTCA CCTGCTCGAC CGGCTTGCGC AACAAGGCCT ATGGAGTGCT
GCCATCGGCA CCGGCCTTGT TTCGGCGCTG CTGTCCTCGG TGATGAACAA CATGCCCAGC
GTTCTGGTCG GCGCCTTGTC GATCCAGGCC AGCGGCGCAG AGGGCCTGAT ACGTGAGGCG
ATGATCTACG CCAACGTCAT CGGCTGCAAC CTCGGTCCGA AAATCACCCC GATAGGCAGC
CTCGCCACGC TGCTTTGGCT GCATGTGCTG GAGCGCAAAG GCATGCGCAT CACCTGGGGT
TACTACTTTG GTGTCGGCCT CCTGCTGACC CTGCCGGTTT TGCTGATCAC CCTCTCGGCC
CTGGCACTGC GCCTGAGCCT CTGA
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| Protein sequence | MLVAIAVFVL TLTLVIWQPK GLGVGWSAAL GAVIALLAGA VSLHDIPTVW AIVWNATATF
IAVIIISLLL DEAGFFEWAA LHVARWANGS GYRLFAFSVL LGAAVSALFA NDGAALILTP
IVMSMLLALR FSPAATLAFV MAAGFIADTA SLPLVVSNLV NIVSADYFGL GFTEYASVMV
PVNIASVAAT LVVLYLFFRR DIPRRYALDA LKKPSEAIVD RATFKVGMWV LVALLTGLFA
LEPLGIPISA VAAACAAALF AVAAYGHRIS TRRVLREAPW QVVIFSLGMY LVVYGLKNAG
LTDMLTHLLD RLAQQGLWSA AIGTGLVSAL LSSVMNNMPS VLVGALSIQA SGAEGLIREA
MIYANVIGCN LGPKITPIGS LATLLWLHVL ERKGMRITWG YYFGVGLLLT LPVLLITLSA
LALRLSL
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