| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3062 |
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| Symbol | |
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| ID | 5870847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3418024 |
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| End bp | 3419406 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641548178 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001669290 |
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| Protein GI | 167034059 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.301843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCA ATGGCACGCG AATTCGAACG GTCATGGGTG AGATCCAGTC CAGGATAGCC
TCTCGGGCCT ACACACCGGG TGCGAGAGTT CCTTCGGTCC GCGCAATGGC TCAGACAATG
CAGTTTTCGG TTTCTACCGT CCTTGAGGCC TACGAGCGGT TAATGGCAGA GGGTGTACTT
AGCTCGCGCC CTGGTTCGGG CTTTTACGTA GCCGGGCCGG TGGCGCCATT GGCACTCACC
GAACTTGGCC CAAAACTTGA TCTTGAGGTC GACCCGTTGT GGATCTCGCG CCAGTCTCTG
GAAACCTCCA GCGATGCGCT GAAACCGGGA TGCGGCTGGC TACCGCCCTC CTGGATGTTC
GAAGCGGGCA TGCGTAAAGC GCTTCGGGTC GTTGCCCGTT CAGACACGGC CAAACTGACT
GAATACGCTT CTCCGCTTGG GCATCCGCCG CTCAGGCAGT TTTTGTCACG GCGGCTGGCT
GGCATCGGGA TCGAAGCCCC TCTTGAACAG ATCATGCTCA CCGAATCGGG CACGCACGCC
ATCGACCTGA TTTGCCGTTT TCTGCTGGAA CCGGGCGACA CGGTGCTGGT GGACGACCCC
TGCTATTTCA ATTTTCACGC ACTACTGAAA GCGCACAGGG TAAACATCGT AGGCGTACCC
TACACGGCAA CGGGCCCAGA CATCGAGGCG TTCGGCACTG CCCTGCTCGA GCACGCCCCC
CGGTTGTACA TCACCAATTC CGGCATCCAC AACCCAACAG GGGCCACCCT CTCTCCGGTC
ACGGCGCACC GCCTGCTCAA GCTGGCCGAC AACTCCAGCC TGGTGATCGT GGAGGACGAT
ATCTTCGCCG ACTTCGAACA TACGCCCGCG CCACGCCTGT CTGCCTTCGA TGGCCTCTCT
CGCGTCATCC AGATCGGCAG CTTTTCCAAG ACTATCTCCG CCTCTGTCCG CTGCGGCTAT
ATCGCTGCGC GTGGTGAATG GATCGACAGC CTGGTCGACC TCAAGATTGC GACTACCTTC
GGCGGTGGGC GCTTGGCCGC GGACATCATC CATCACGCTA TTACCGATAG CGGGTACCGC
AAACACATGG AAAGCGTTCG CCTCCGGTTG GCCGAGCAAA TGGACGTAAC AGTGGCCAGG
CTTCAGGCCA TTGGTATCAA GCCCTGGATA ACGCCCCAGG CAGGTATGTA CGTGTGGTGC
CAGCTCCCAC AGGGCAAGGA CGCAGCAACG CTGGCGAGAA CCTGTTTGAA TGACGGTGTA
GTGCTTGCGC CCGGAAATGC TTTTAGCCAG TCCATGACGG CAGGCGACTT CCTTCGTTTC
AACGTTGCTC AATCAGGTGA CGCCAGAGTT TTCGACGTGT TGAAACGGGC CCTGGGTGCT
TAG
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| Protein sequence | MKRNGTRIRT VMGEIQSRIA SRAYTPGARV PSVRAMAQTM QFSVSTVLEA YERLMAEGVL
SSRPGSGFYV AGPVAPLALT ELGPKLDLEV DPLWISRQSL ETSSDALKPG CGWLPPSWMF
EAGMRKALRV VARSDTAKLT EYASPLGHPP LRQFLSRRLA GIGIEAPLEQ IMLTESGTHA
IDLICRFLLE PGDTVLVDDP CYFNFHALLK AHRVNIVGVP YTATGPDIEA FGTALLEHAP
RLYITNSGIH NPTGATLSPV TAHRLLKLAD NSSLVIVEDD IFADFEHTPA PRLSAFDGLS
RVIQIGSFSK TISASVRCGY IAARGEWIDS LVDLKIATTF GGGRLAADII HHAITDSGYR
KHMESVRLRL AEQMDVTVAR LQAIGIKPWI TPQAGMYVWC QLPQGKDAAT LARTCLNDGV
VLAPGNAFSQ SMTAGDFLRF NVAQSGDARV FDVLKRALGA
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