| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3054 |
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| Symbol | |
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| ID | 5870839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3409443 |
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| End bp | 3411044 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641548170 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001669282 |
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| Protein GI | 167034051 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.350986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCG ACCTTGCGGC CTTTCACTTC CTTCGCCCCT GGTGGTTGCT GCTGATCGTG
CCGGGTGTCG TGCTGCCCTT GCTGTGGTTG CGCCGACACG ATCTGCGGCA TCAGTTGAGC
GGCATCATCG CTCCACACCT GATCAAGCAC CTGATGATCA CCCCGGCCCA CGCGCGGCGG
CTGCGCCCGG TCCACCTGCT GGGGGCGGCA CTGGTGTTGA GTGCCATTGC CGCTGCCGGG
CCGACCTGGC AGCAGGACAC ACCTGATTTT CTCGACGACC GCGCACCGCT GATCGTTGCC
GTGGACCTGT CGCCCTCGAT GGATGCCGAC GATGTACCGC CCAGCCGGTT GGCCGCAGCC
CGACATACCT TGCACGACCT GGTCATGCGC CGTGGCGGCG CGCGTACCGG CCTGATCGCC
TATGCCGGCA GTGCGCATCT GGTGTTGCCT TGCACTGAAG ACCCAGGCTT GCTGGATACC
TTTATCCAAG CCTTGTCGAC CGACTTGATG AGCGCGCCCG GCAAGAATGT ATTGGGCGTG
ATCGACGAGG CCTTGAAGCT GCTGGGTGCG GAAAAGTCCC CTGGAACCTT GCTGCTGTTG
ACCGATGGCG CCGATGCCAG CCAGTTCGAC GCCATCGCCA AGCGGCTGGC CGGCACGCAG
TTGCAAGTGT TGGTGCTGGC TGTCGGCAGC CAGTCCACCG GCCCCCTGCG CAACGCCCAG
GGCATGCCGC GCCTGGATAC CCTGGGCCGG CCGGTGCTAG GGGGCTTCGA CGTTCAGGGC
CTCAAGGGCC TGGCCAAGGC CGCCAATGCA CCCTTGGGCA GTTTATCGCT GAACGATGAC
GACCTGGATT GGGTCGAGTT GCATGCCCAG CGGCACTTCA AGGCCGCCAG TGCCGAAGCC
GACCAGGTGC ACTGGAAAGA TGCCGGTTAC TGGCTGTGCT GGCCGTTGTT GCTGGTGGTG
CTGTTCAGCG TGCGACGTGG CTGGCGGGTG AACTGGCTGC CGGGGCTTTT GTTAGCCGTG
CTGCTGGGGA CAGGCGCTGA GCCCGTCAGG GCCGGGGGAT TGGCCGATGC GTTTTTCACG
GCTGACCAGC AAGGGCGCTG GGCATTCGAG CATGGCCGTT ACCCGCAGGC CGCCGCGCAC
TTTCGCGACC CTTACTGGAA GGGCGTTGCC GCCTACGAAG CGGCCGACTA CCCGGCCGCG
CTGGCGAACC TGGGCAAGCT GGACACGGCA CCGGCCTGGT TCTATCAGGG CAACAGCTAT
GTACGGCTTT TCAAGTTCCC GCAGGCAATA GCGGCATATC GCCAGGCGCT GCGCCTGCAA
CCTGACTTTG CCGAGGCCAA GGCCAACCTG GCGCTGGCCG AGGCGTTGCT CAAGGACTAT
GAGGGCCAGC AGCAAGCCGG CACGCCTGAC GAAAAGGCCG ACAAGGTGGT GGAGGATCAG
ACACCCGCCG CCGGCGACCA GCAACAACAG CAGAAAACGC CGCAGGCGGC CTCCGACCAG
CTGTGGCTGA ACAACCTCAC CACGTCCCCT GCGCAGTTTC TCAAGCGCAA GTTCTCGATC
CAGGATGCCG CCGCGCAGCA AGCGGCCAAG GAGGCGCCAT GA
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| Protein sequence | MTIDLAAFHF LRPWWLLLIV PGVVLPLLWL RRHDLRHQLS GIIAPHLIKH LMITPAHARR
LRPVHLLGAA LVLSAIAAAG PTWQQDTPDF LDDRAPLIVA VDLSPSMDAD DVPPSRLAAA
RHTLHDLVMR RGGARTGLIA YAGSAHLVLP CTEDPGLLDT FIQALSTDLM SAPGKNVLGV
IDEALKLLGA EKSPGTLLLL TDGADASQFD AIAKRLAGTQ LQVLVLAVGS QSTGPLRNAQ
GMPRLDTLGR PVLGGFDVQG LKGLAKAANA PLGSLSLNDD DLDWVELHAQ RHFKAASAEA
DQVHWKDAGY WLCWPLLLVV LFSVRRGWRV NWLPGLLLAV LLGTGAEPVR AGGLADAFFT
ADQQGRWAFE HGRYPQAAAH FRDPYWKGVA AYEAADYPAA LANLGKLDTA PAWFYQGNSY
VRLFKFPQAI AAYRQALRLQ PDFAEAKANL ALAEALLKDY EGQQQAGTPD EKADKVVEDQ
TPAAGDQQQQ QKTPQAASDQ LWLNNLTTSP AQFLKRKFSI QDAAAQQAAK EAP
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