| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3050 |
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| Symbol | |
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| ID | 5870835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3402818 |
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| End bp | 3405346 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641548166 |
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| Product | spermine synthase |
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| Protein accession | YP_001669278 |
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| Protein GI | 167034047 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCAC CTGCAGCATC TTCCGCTGTT TCCCGTGAGC CTCGCACCCA GTCCCGTCCA
CTGCTCGCAT TGCCTGCCAC GCTGCTGTTC CTCTCTGGTG CTGCCGGTCT TGTCTACCAA
GTGCTGTGGA TCAAGCAACT GTCATTGGTC GTGGGCGTGG AAGTGCATGC CGTCGCCACC
GGTATCAGTG CCTTTTTTGC CGGGCTTGCC TTTGGCGGCC TGCTGTTCGG GCGTTGGGCC
GACCGCCTGC AACGCCCAGT GCGCCTGTAC GTTTATCTTG AGCTCGCCGT TGCGCTGCTG
GGGCTCGGCG CCACCCTTGG CCTGGCCCAT GCCGCCGGAC CGTTCGCCCG CCTCGAGGCC
AGTGCCGGCC TGCTGGCCTG GGCGCTGCCC TTCGTGCTGG TGGGCGTACC GGCCTTGCTC
ATGGGCGGTA CCTTGCCCGT ACTGGTGCGC ACGCTGGCGC CTGTCACCGG GCAGTTGGCA
GAGGCGGGTG GGCGCTTGTA CGCGGCGAAC ACCGCTGGCG CGATTGCCGG CACGCTAGCG
GCGGCCTTCG TACTGCTGCC GCGCCTTGGC GTTACAGGCA GCGCCTGCGC AGCTGCCAGC
CTGAACCTGC TGGCAGCATT GGGTGCCTGG CTTTCTTACC GGCGAGAAGT GAGCTTGCCG
CCGCTTGCCA ATGCCTCGTC GACATCACGC TCGCCGCAGG CACGCCTGGC CATCGCCCTG
TATTGCATCG CCGGGGGAGT GGCGCTGGGC TACGAGGTGG TGTGGAGCCA GTCGATCGTG
CCCTTCATGA GCACCCGGTC CTATGCCTTT GCCGTGGTGC TGGCCACTTA CCTGGCCGGG
CTGCTGGCCG GTAGTGCGCT GTATGCCAGG CGTGCCGACC GAATTCGTGA TCCTTGGGGT
GTGTTCGGGC TGTTGATTGC CATTGCCGGG CTGCTTGCCC TGTTGCAGCT TGCCGGGCTG
GGCCGCTGGC TGGTGCAGGC CCAGACGCAG GCCGAACTGT TCGCCCTGCA GCTGACTGGC
AACGAACTGC TCGGCATGTG CGCGCGTTTC GCGGTGGCGG CCGCGTGCAT GGTGTTGCTT
CCAACCACAT TGCTGGGCGC CGCATTTCCA CTGGCCTTGC GCCTGGTGGT GGACAGCGGT
CATGTGGGGC GGGATGTGGG CGCGGTGGTG GCGCTCAACA CCCTGGGTGG CATCGCCGGC
GTGCTGCTCA CGGGGTTCGT ACTGGTGCCG CAATTGGGCC TGGTACGTGC CTTGGGGGCG
CTTGCCGCAA TGGCCGTGCT GGTAGGGTTG GTGGCGGTGT GGCGTGGCCA GGGTGTACGT
CGCCCTGCTG CGTTGGCCGT GTGCCTGGTG GCCCCTGCAA CCGTGCTGGT GGTGCTGTTG
ATGCCGCCGC AGCGCCTGGC CGAGCTGCTG CCAGGCGCAC GCAACGGGCA ACTCACCTAC
TACCATGAGG GCAAGGGCGG CACGGTGGCA GTGGTCACCC AAGGGCGCCA GGGGCAAACC
TTCAGCCGCC TTTACATCCA GGGTGTTTCC AATACCGGCG ACGCCATGCC ATCGCTGCGC
TACATGCGCT TGCAAGCCTT GCTGCCGTTG CTGATCCACA ATGGCGAGCC GCGCTCGGCC
TTGGTGATCG GCTTTGGCAC CGGTATCACC GCCGGGGCGA TGCTACGTTA CCCTGGACTG
GAGCGCCCGG TGGTGGCCGA ATTGCTGCCT GAAGTCTTGC AGGCGGCGCC CCGTTTCAAA
GGCAACTATG CCGCGGTGGC GGACCCACGC CTGGACATTC GCTTGCGCGA TGGTCGCCGT
GAGTTGCTGC GCAGTGAGGC GCGCTACGAT TTGATCACCC TGGAACCACC GCCACCCTCG
GCGGCCGGCG TGGTCAACCT GTACTCGCGC AACTTCTATC AGCTGGCCGC CGCCCGCTTG
CAACCTGCTG GCCTGGTCGC GCAGTGGCTG CCCTTGCCGA CCCAGAACGA CGAAGACAGC
CAATCGCTGG TGCGCAGCTT CATCGATGTC TTCCCCCATG CCACGCTGTG GACCACTGAG
TTCCACGAAA TGCTGCTGAT CGGCTCATTG CAGCCATTGC AGTTGGATGT ACCGCGTATC
CGCCAGCGCC TGGCGCAAGC GAGCGTGGCC CAGACGCTGG CCGAGGTGGG TGTCGCTTCG
CCAGAGGCCT TGCTGGCCAC CTGGATTACC GACCGTGCCG GGCTTGAACG TTACGCCGGC
GATGCATTGC CAGTGACCGA CGATCAGCCA CGCATCGAGT ACGCGCCGTG GGTGCGCCCC
CGGGAAATCA CCCGTGTGCT GCCAGCCTTG CTGGCCCTGC GCAGCACGCC ACCGCTGCAG
GGCGCGGAAC CAGGCTTCGC CAGCGCGGTG AGTGACCAGT GGCGCAGCCT GGCACTTTTC
TACAGCCTCA GCTTGCATGC CTACAACGGC AACCGCCAGG CCTGGGCGCG GGAAGCCCGC
GAACTGGCCC GCAGCGACGG CGGCAACCCG TATTATCGCT GGTTCCTTGG CCCCAGTACC
GGCCAGTGA
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| Protein sequence | MASPAASSAV SREPRTQSRP LLALPATLLF LSGAAGLVYQ VLWIKQLSLV VGVEVHAVAT
GISAFFAGLA FGGLLFGRWA DRLQRPVRLY VYLELAVALL GLGATLGLAH AAGPFARLEA
SAGLLAWALP FVLVGVPALL MGGTLPVLVR TLAPVTGQLA EAGGRLYAAN TAGAIAGTLA
AAFVLLPRLG VTGSACAAAS LNLLAALGAW LSYRREVSLP PLANASSTSR SPQARLAIAL
YCIAGGVALG YEVVWSQSIV PFMSTRSYAF AVVLATYLAG LLAGSALYAR RADRIRDPWG
VFGLLIAIAG LLALLQLAGL GRWLVQAQTQ AELFALQLTG NELLGMCARF AVAAACMVLL
PTTLLGAAFP LALRLVVDSG HVGRDVGAVV ALNTLGGIAG VLLTGFVLVP QLGLVRALGA
LAAMAVLVGL VAVWRGQGVR RPAALAVCLV APATVLVVLL MPPQRLAELL PGARNGQLTY
YHEGKGGTVA VVTQGRQGQT FSRLYIQGVS NTGDAMPSLR YMRLQALLPL LIHNGEPRSA
LVIGFGTGIT AGAMLRYPGL ERPVVAELLP EVLQAAPRFK GNYAAVADPR LDIRLRDGRR
ELLRSEARYD LITLEPPPPS AAGVVNLYSR NFYQLAAARL QPAGLVAQWL PLPTQNDEDS
QSLVRSFIDV FPHATLWTTE FHEMLLIGSL QPLQLDVPRI RQRLAQASVA QTLAEVGVAS
PEALLATWIT DRAGLERYAG DALPVTDDQP RIEYAPWVRP REITRVLPAL LALRSTPPLQ
GAEPGFASAV SDQWRSLALF YSLSLHAYNG NRQAWAREAR ELARSDGGNP YYRWFLGPST
GQ
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