| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3049 |
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| Symbol | |
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| ID | 5870834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3401146 |
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| End bp | 3402774 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641548165 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001669277 |
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| Protein GI | 167034046 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.369639 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGTC TGTTGACTGC GCTGTTGATG CTGTGTGCCT TGCTGCCGCT GGCGGGGCAT
GGCAAGGATG CGGTGGGTAG CGCGACCGAT GGCGTGCCGG GTGAACCGGC AGAACTGCGC
ATCGCCAACC GCAGCATCTT CACCTTCCAC GCCACCTTGC TCGGCGAGAC CCCGGCCGCG
CGCGCGCAGC GGGCGACGGC GGTGATCGAT GAGGCATTGC GCGGCACCGA CGAGCTGAAA
GTCAGCGTCG ACCCCATCGT CAACAGCCAC CTGGTGCTGC TAGGTGGGCG GCGGGCCTTC
ATCGTCGCCC CGCAGGACCT GGGCGTGGAG GGTGGCGACA CCCGGGAGGC GGCCGAGCAG
GCTGCGGCCA CGTTGCGTCA GGTCGTGGAT GAAACCGGCG AGGCGCGCAG CCTGCGTTTT
CTGCTCAAGG CGCTGGGCTT TTCCGCCGTC GCGACACTGG TGTTCGTGCT GCTGATCAAG
GCTGCCAACC TGGGCCGACG CAGACTGCGC GGCCGTTTGC CGCAATTGAT GCGAGAACGA
GCCCGGCAGA TCAAGGTAGG CCAACTGCCG CTGTTCGACA TGCAGTATGT GTACTTTGTG
ATCGACCGGC TGCTGCGCCT GATGTACTGG GTGATCGTCT TGCTGCTTGG CTACCAGTGG
CTGAGCTTCG TGCTGTCGCA ATTCCCCTAT ACCCGGCCGT GGGGCGAAAG CCTCAACGTG
CATCTGCTCG ACCTGCTGCG CTACCTGCTC GACGGCATTC TGCATGCCAT TCCCGGTATT
GCCGTGGCCG TCATGATCTT TTTCATCGCC CGCGGCATCA GCGGCTTCAG CCGCCGCGTG
CTGGAGCGCA TGGCCCGCCC GGGTACGCTG AAGTGGTTGA CCGAAGAAAC CTTGCAGCCC
ACCACCCGGC TAACTTCACT GGCGATCTGG CTGTTTGCCC TGGTGATGGC TTACCCGTAC
CTGCCGGGCT CTGGCACCGA TGCCTTCAAA GGGCTTTCGG TGCTGTTGGG CCTGATGATT
TCGCTGGGTG CCTCCAGCGT GGTCGGGCAG GCTGCGGCGG GGCTGATCCT GACGTATTCG
CGCACACTGA AGGCCGGTGA ATACGTGCGG GTAGGGGATA ACGAAGGCAC GGTGACCGAG
GTGGGCATGT TCAACACCAC CATCCGCACC GGTTTGGGCG AGGTGTTGAC GCTGCCCAAC
TCGATGATCA CCGGGTCGGT GACGCGCAAC TATTCACGGG TGGTGCAGGG CCAGGGGTAC
ATCGTCGATA CGGTGGTCAC CATCGGCTAT GACACGCCCT GGCGCCAGGT CGAGGCGATG
CTGGTGGAGG CCGCGCAGCG CACCGAGGGC ATTCTTGCCA AACCCAGGCC GCAGGTGTTC
CAGACCGGGC TCTCGGACTT TTACCCCGAA TACCGCCTGG TGGGCCAAGC GGTGCCCAGC
GAGCCACGGC CGCGCGCCGA GCTGTTGAGC CTGTTGCACG CCAACATCCA GGATGTATTC
AATGAATACG GCGTGCAGAT CATGTCGCCG CATTACCTGG GCGACCCGGC TCAGGAGAAG
TGGGTGCCGC GTGAGAAGTG GTTTGCCGCG CCGGCGCGGG AACCGGGTGG CGATGGCAAG
GATGCCTGA
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| Protein sequence | MNRLLTALLM LCALLPLAGH GKDAVGSATD GVPGEPAELR IANRSIFTFH ATLLGETPAA
RAQRATAVID EALRGTDELK VSVDPIVNSH LVLLGGRRAF IVAPQDLGVE GGDTREAAEQ
AAATLRQVVD ETGEARSLRF LLKALGFSAV ATLVFVLLIK AANLGRRRLR GRLPQLMRER
ARQIKVGQLP LFDMQYVYFV IDRLLRLMYW VIVLLLGYQW LSFVLSQFPY TRPWGESLNV
HLLDLLRYLL DGILHAIPGI AVAVMIFFIA RGISGFSRRV LERMARPGTL KWLTEETLQP
TTRLTSLAIW LFALVMAYPY LPGSGTDAFK GLSVLLGLMI SLGASSVVGQ AAAGLILTYS
RTLKAGEYVR VGDNEGTVTE VGMFNTTIRT GLGEVLTLPN SMITGSVTRN YSRVVQGQGY
IVDTVVTIGY DTPWRQVEAM LVEAAQRTEG ILAKPRPQVF QTGLSDFYPE YRLVGQAVPS
EPRPRAELLS LLHANIQDVF NEYGVQIMSP HYLGDPAQEK WVPREKWFAA PAREPGGDGK
DA
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