| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3041 |
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| Symbol | |
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| ID | 5870826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3388830 |
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| End bp | 3390083 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641548157 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001669269 |
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| Protein GI | 167034038 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.764893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCCCC TACGTTTGCA TTCAGGACGG ACGCTTGCGC TCGGCCTGGT AATCCTGCTG
CCGACGCTAT CGGCGCAGGC CGCTTCATTT TCATTGGACG ATGCGCTGCA ACTGGCAGAG
CGCAATGCCC CTTCGCTTCA GGCACGCCAG GAGCAGGTGT CGGCGACACG CAGCGCGATC
CTGCCTGCGG GTGAACTGCC CGACCCTCGG CTGAATCTCG GGCTGCAGAA CCTGCCGGTG
GACGGCAGTG ATCGCTGGAG CACAAGCCGA GACTTCATGA CCATGCAGGT GGTTGGCCTG
TCCCAGGAAG TGCCCAACAG AGACAAACGC AAGGCACGGG TCGAAACCGC GCGGGCAGCG
GTTGAACGCG CCGATGCCGA GGCGGTTCTG GAGCGTCAAA ACGTACGCGC AGCGACGGCA
CAGGCGTGGC TGGCGGCCTA CACGGTGCAG CGAAAGCTGC AGCAATTCGA CGAATTCTAC
AAAGAGAATC ACCTGCTGAC TTCGGCCGTC CACGCCCGCC TGGCCGGCGG AGGCGGTGCA
GCAACCGATG CACTTGCTCC AAACCAGGAA ATGGCTCAGT TGGACGCGCA GAAAGACCTG
CTGCTAAGCC AGGCGAGCCA GGCGCGAGCC GCCCTCAAAC GCTGGACCGG CCAGGACGCA
GATGTGCAAG CACGCGCATT TCCTCAGTGG GCGGTAAATG CAACTGACTA CCTGCATGCG
CTACACGCCC ACCCTGCGCT GGCGGTTTAT GGCGCCATGA GCCGAGAAGC CGAAGCCCAG
GTGCATCAGG CGCAAGCCGA GAAGAAGTCT GACTGGGGTT GGCAACTGGA CTACCAACGG
CGCGGGCCGG CATTCAGCAA CATGGTGAGT GTGCAGGTCA GTTTTCAATT GCCCTTGTTC
ACAGGCTCTC GGCAAGACCC GATGATCGCC GCCCGGCGTG CACAAGTGCG CCAGCTGGAG
GACGAGCAAG ACGCGGCCCT GCGGGAGCAT ACCGCGCAGC TGGAGGCAGA CATGGCTGAA
TACCAGCGCC TGCAGCGTGC AGTGGCGCGA AGCCGAGACA CCCTGCTACC GCTCGCCGAG
GCACGCGTGC GTTTGGCATT GGCAGATTAC CGAGCAGGCA AATCGGCCTT GAGTGAAGTG
CTCGCGGCGC GGCGGCAACG GGTAGACGCG CGGTTACAGG ACTTAGACCT GCAAGGCCAA
CTGGCAGCGA CAGCGGCACG TTTGCATTTC GCGTACGGCG AGGTGCGGGC ATGA
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| Protein sequence | MTPLRLHSGR TLALGLVILL PTLSAQAASF SLDDALQLAE RNAPSLQARQ EQVSATRSAI
LPAGELPDPR LNLGLQNLPV DGSDRWSTSR DFMTMQVVGL SQEVPNRDKR KARVETARAA
VERADAEAVL ERQNVRAATA QAWLAAYTVQ RKLQQFDEFY KENHLLTSAV HARLAGGGGA
ATDALAPNQE MAQLDAQKDL LLSQASQARA ALKRWTGQDA DVQARAFPQW AVNATDYLHA
LHAHPALAVY GAMSREAEAQ VHQAQAEKKS DWGWQLDYQR RGPAFSNMVS VQVSFQLPLF
TGSRQDPMIA ARRAQVRQLE DEQDAALREH TAQLEADMAE YQRLQRAVAR SRDTLLPLAE
ARVRLALADY RAGKSALSEV LAARRQRVDA RLQDLDLQGQ LAATAARLHF AYGEVRA
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