Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3025 |
Symbol | |
ID | 5870810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3373237 |
End bp | 3373632 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641548141 |
Product | hypothetical protein |
Protein accession | YP_001669253 |
Protein GI | 167034022 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.47992 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACGTA TGGAGGTATC GGGAGGGCTG CACTTCACCC GACTGTTGTT GCTCTTTGGC AGCCTGTATC TGCTGATGCC GGCTGCCGCC GAAGGTTTCG TGATCGGCGA GTTGTCGCCG CTGCTGGCGC TGGCTACGCT GCCGACAATC CTCGGTTTCT TCTGTACCAC CAAGGCCATC GAGTACCTTA AGCCATCCCA CGTCCAAGCG TTGGAGCTTA CGGAGCCACT GTTCGCCAGA AGTCGTCATG TGAACCAGTT CAACGCCCGA GGCTCGCAAT TGAGTAGCAC GTGTTTGAGT TCACTGAATT CCTCCAGGCC TGTCGCCGAT AGCTCGCGGC CGATGCCGCT GGCCTTGAAA CCACCCCAGG GCGCCTGGGG AAATGCCAGG TTGTAA
|
Protein sequence | MKRMEVSGGL HFTRLLLLFG SLYLLMPAAA EGFVIGELSP LLALATLPTI LGFFCTTKAI EYLKPSHVQA LELTEPLFAR SRHVNQFNAR GSQLSSTCLS SLNSSRPVAD SSRPMPLALK PPQGAWGNAR L
|
| |