Gene PputGB1_3021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3021 
Symbol 
ID5870806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3368805 
End bp3369890 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content66% 
IMG OID641548137 
ProductAraC family transcriptional regulator 
Protein accessionYP_001669249 
Protein GI167034018 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.826436 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCGG CGCCCATTGC CGAGCCTGGT GCAACCATGA AACGATCCGA AACCCTTGAC 
CTTCAGTGGC AGGGCCCTGC CAGCCCTCCG CTGCGCATCG GCATTCTGTT GCTGCCATCG
TTTTCCAACT TCGGCCTGGC CTCGCTGATC GAACCGCTCT CGATCGCCAA CTGGCTGGCC
CAGTGCAACC TGTTCCAATG GACCCTGCTC TCGGTAGACG GCCAGCCGGT GCCCGCCAGC
AACGGCCTGC TCGCCGGTGC CCAGGCGGGC ATCGGCGAGC ACAGCGAATT CGATGCCTGC
GTGGTGATCG CCAGCTTCGA TGTGCACCGC CACGCGCGCA ACCCGGCCCT CAAGGCCTGG
ATCAAGCGCC AGGCGGCCTT CGGCGCAGTC ATGGTAGGGA TCGAAACCGG CACCGAGCTG
CTGGCTGCGG CAGGTGTGCT CGACGGCCAC CCGGCCGCCG TCCATTGGGA CAACCTGCAA
GGTTTCCAGG AAAGCTACCC TAGGGTGCAA GCCTGCGCGC AGCTCTACTC GTTGGGCCGC
AAGCGCCTGA CCTGCGCAGG CGCCACTGCC GTGCTGGACA TGGTGCTCAG CTGGCTGGAC
CGGCTGGCCG GTGGCAACCT GGCACGCGAA GTGGCCATGC ACATGCTCAT CGAGCAGGTA
CGCGAGCCGC AGGTCCAGCA AGCCGAAGGC TATCGCCGCA ACCTGCATGC CCAGGCCGGC
AAGATGGGGC GGGCCATCGA GTTGATGGAA CAGCACCTGG AAGAACCGCT GAGCTGCGAG
GCCATCGCCG AGCGTGTGGC ACTGTCGCGT CGCCAACTGG AGCGCCAGTT CATGCAGCAC
ACCGGCCTTA CGCCGCTGAA GTACTACCTC AGCCTGCGCC TGGCGCGCGC CCACAACCTG
TTGCAGCAAA CCCGCATGAG CGTTGCCCAG GTTGCAGCCA GTGCAGGTTT CGGCTCGCTG
GAACACTTCT CCCGCGCCTA CCGCGCCAAA TTCGGCTGTG CACCGAGCAA CGACCGTTCG
CAGAGTTTGA GCGCCCCGGT CATGCGCCAG CCGTTGGGGC ATGACCGGCA GCCGTTGGCG
ATCTGA
 
Protein sequence
MQPAPIAEPG ATMKRSETLD LQWQGPASPP LRIGILLLPS FSNFGLASLI EPLSIANWLA 
QCNLFQWTLL SVDGQPVPAS NGLLAGAQAG IGEHSEFDAC VVIASFDVHR HARNPALKAW
IKRQAAFGAV MVGIETGTEL LAAAGVLDGH PAAVHWDNLQ GFQESYPRVQ ACAQLYSLGR
KRLTCAGATA VLDMVLSWLD RLAGGNLARE VAMHMLIEQV REPQVQQAEG YRRNLHAQAG
KMGRAIELME QHLEEPLSCE AIAERVALSR RQLERQFMQH TGLTPLKYYL SLRLARAHNL
LQQTRMSVAQ VAASAGFGSL EHFSRAYRAK FGCAPSNDRS QSLSAPVMRQ PLGHDRQPLA
I