| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3009 |
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| Symbol | |
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| ID | 5870794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3353351 |
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| End bp | 3354490 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641548125 |
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| Product | alcohol dehydrogenase |
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| Protein accession | YP_001669237 |
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| Protein GI | 167034006 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.479087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.692711 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCAA TCGTGTACAA CGGCCCACGT GACGTCGCGG TGAAGGATGT ACCGGACGCA
AAAATTGAAA AGCCTACGGA CGTGCTGGTA CGCATTACCA CGACCAACAT CTGCGGTTCT
GATTTGCACA TGTACGAGGG CCGAACCTCG TTCGAAGCCG GGAGAGTTTT TGGTCACGAA
AATCTCGGTG AGGTAATCGA GGTAGGGGCA GGGGTCGACC GGGTCAAAGT CGGTGACCGA
GTCTGTCTAC CTTTCAATAT CGGCTGCGGG TTCTGTGAGA ACTGTGAGAA AGGCCTCACT
GGATTCTGCC TTACAGCGAA TCCTGGTGCT GCGGGCGCTG CTTACGGTTT TGCCGAGATG
GGCCCGTATC AGGGCGGGCA GGCCGAGCTG CTGCGTGTGC CCTATGCGGA TTTCAACTGC
CTGGTACTGC CGGAAGATGC CCAGGAGCGT GAGGATGACT ATGTCATGCT CTCGGATATC
TTCCCTACAG GCTGGCATGC AACAGAGCTT GCCGGTTTGC TGCCGGGTGA AAGCATTGCG
ATTTACGGCG CAGGGCCTGT CGGCCTGATG GCGGCCCATT CGGCAATCAT CAAAGGCGCG
TCCCAGGTGT TTGTCATCGA CAACCAACCG GATCGCCTGC AACTCGCCGC GCAGCTTGGC
GCAACCCCTA TCAATGCAGT CGAGCAGAAG GCCGTGGAAG AGATCATGAA CCTGACCCAT
GGCAAAGGTA CTGACCGGGG CTGTGAGTGC GTGGGTTACC AGTGTTGCGA CAAGCATGGC
CATGAAGCGA ACTACCTCAC CATGAACAAC CTTGTCGCTT CCACCAAGGC CACAGGCGGC
ATAGGCGTGG TTGGGGTGTT CGTTCCAGAA GATCCTGGAG CGAAAAACGA ACTGGCGAAG
GAGGGCAAGA TGGCCTTCGA CTTCGGTGCG TTCTGGTTCA AGGGCCAACA GATCCGGACA
GGCCAGGCGA ATGTGAAGGC CTATAATCGC CGCCTGGCAG AGCTCATCCA TCATGGGCGC
GCCAAGCCCT CACAGATTAT TTCCCATCGT TTGAAATTGG CCGAAGGCCC CGAGGCCTAT
AAACACTTCG ATGCGCGGGA TGATGGCTGG ACGAAAGTGG TGCTGAAGCC TGCGGCTTGA
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| Protein sequence | MKAIVYNGPR DVAVKDVPDA KIEKPTDVLV RITTTNICGS DLHMYEGRTS FEAGRVFGHE
NLGEVIEVGA GVDRVKVGDR VCLPFNIGCG FCENCEKGLT GFCLTANPGA AGAAYGFAEM
GPYQGGQAEL LRVPYADFNC LVLPEDAQER EDDYVMLSDI FPTGWHATEL AGLLPGESIA
IYGAGPVGLM AAHSAIIKGA SQVFVIDNQP DRLQLAAQLG ATPINAVEQK AVEEIMNLTH
GKGTDRGCEC VGYQCCDKHG HEANYLTMNN LVASTKATGG IGVVGVFVPE DPGAKNELAK
EGKMAFDFGA FWFKGQQIRT GQANVKAYNR RLAELIHHGR AKPSQIISHR LKLAEGPEAY
KHFDARDDGW TKVVLKPAA
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