| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3001 |
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| Symbol | |
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| ID | 5870786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3347690 |
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| End bp | 3348547 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641548117 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001669229 |
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| Protein GI | 167033998 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.798039 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGACT TCCCTACCCC GCCCTTCCCT TCGCAGCCTC AAGATGTCCC CGGCTCACAG
CGCAAGATGG AGCCCTACCC GGATTGTGGT GAGCAGTCGT ATACCGGCCA CAATCGACTC
GAAGGCAAGA TTGCACTCAT CACCGGAGCA GACAGCGGCA TCGGTCGGGC AGTAGCGATT
GCCTATGCCC GTGAAGGGGC CGATGTCGCC ATCGCTTATC TGAATGAGCA TGAAGATGCC
CAAGAAACCG CGCGCTGGGT TGAGTCCGCG GGCCGTCAAT GCCTGCTGTT GCCCGGAGAC
CTGGCGCAGA AACAGCACTG CTACGACATC GTCGAAAAGA CCGTTAGCCA ATTCGGGCGT
ATCGACATCC TGGTCAACAA CGCGGCGTTC CAGATGTCCC ACGAGACCCT GGAAGAAATC
GACGATGACG AATGGGTGAA GACCTTCGAT ACCAACATCA CCGCGATCTT CAGGATTTGC
CAGGCGGCTC TGCCTTCCAT GCCCAAGGGA AGCTCGATCA TCAATACGAG CTCGGTCAAT
TCCGACGATC CATCCCCCAG CCTGCTGGCC TATGCCACGA CCAAGGGGGC CATTGCCAAC
TTCACTGCTG GCTTGGCGCA GTTGCTCGCC AAGAAAGGCA TCAGGGTCAA CAGCGTCGCG
CCAGGCCCTA TCTGGACGCC TTTGATTCCG GCAACCATGC CGGACGAGGC CGTCAAGAAC
TTTGGTTCCA GCTACCCGAT GGGGCGCCCG GGGCAGCCGG TCGAAGTCGC GCCGATCTAC
GTGCTGCTGG GCTCCGACGA AGCCAGTTAC ATCAGTGGCT CACGTTACGC AGCGACTGGC
GGTAAACCGA TACTTTAG
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| Protein sequence | MRDFPTPPFP SQPQDVPGSQ RKMEPYPDCG EQSYTGHNRL EGKIALITGA DSGIGRAVAI
AYAREGADVA IAYLNEHEDA QETARWVESA GRQCLLLPGD LAQKQHCYDI VEKTVSQFGR
IDILVNNAAF QMSHETLEEI DDDEWVKTFD TNITAIFRIC QAALPSMPKG SSIINTSSVN
SDDPSPSLLA YATTKGAIAN FTAGLAQLLA KKGIRVNSVA PGPIWTPLIP ATMPDEAVKN
FGSSYPMGRP GQPVEVAPIY VLLGSDEASY ISGSRYAATG GKPIL
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