Gene PputGB1_2994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2994 
Symbol 
ID5870779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3343688 
End bp3344134 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content55% 
IMG OID641548110 
Producthypothetical protein 
Protein accessionYP_001669222 
Protein GI167033991 
COG category[S] Function unknown 
COG ID[COG5478] Predicted small integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.547763 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCG CCCAGTTCTG CCAATGGCTC GCCAACCACG CCGGTAAGCC GAGCACCTTC 
TTGATCGCCT TGGTGTTGAT TGCCTTGTGG GCTGCCTCTG GGCCCTGGTT TCACTACAAC
GATACCTGGC AACTCATCGT CAATACGTCG ACCACCATCA TCACATTCCT GATGGTTTTC
CTGATCCAGA ACACCCAGAA CCGGGATAAC GACATCATCC ACGTGAAGCT CGACGAACTG
ATTCGCGCTA CGAAATCTGC GGAGCAGTCG GTATTGGATC TCGAAGCGCT CGATAACCGG
GAAATCCATA AACTCCGCAA GCAATACCAG GCGATGGGCA GCGGATGTGA CCCCCACCAT
CAGGCGCCTG CTGGGAATCA GACGGACGAT GTTGCTCGAG AACCTGCAGC GCTAGAGACC
TTATTGGTCG AACGGCAGGA GAGTTGA
 
Protein sequence
MKFAQFCQWL ANHAGKPSTF LIALVLIALW AASGPWFHYN DTWQLIVNTS TTIITFLMVF 
LIQNTQNRDN DIIHVKLDEL IRATKSAEQS VLDLEALDNR EIHKLRKQYQ AMGSGCDPHH
QAPAGNQTDD VAREPAALET LLVERQES