Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2994 |
Symbol | |
ID | 5870779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3343688 |
End bp | 3344134 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641548110 |
Product | hypothetical protein |
Protein accession | YP_001669222 |
Protein GI | 167033991 |
COG category | [S] Function unknown |
COG ID | [COG5478] Predicted small integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.547763 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCG CCCAGTTCTG CCAATGGCTC GCCAACCACG CCGGTAAGCC GAGCACCTTC TTGATCGCCT TGGTGTTGAT TGCCTTGTGG GCTGCCTCTG GGCCCTGGTT TCACTACAAC GATACCTGGC AACTCATCGT CAATACGTCG ACCACCATCA TCACATTCCT GATGGTTTTC CTGATCCAGA ACACCCAGAA CCGGGATAAC GACATCATCC ACGTGAAGCT CGACGAACTG ATTCGCGCTA CGAAATCTGC GGAGCAGTCG GTATTGGATC TCGAAGCGCT CGATAACCGG GAAATCCATA AACTCCGCAA GCAATACCAG GCGATGGGCA GCGGATGTGA CCCCCACCAT CAGGCGCCTG CTGGGAATCA GACGGACGAT GTTGCTCGAG AACCTGCAGC GCTAGAGACC TTATTGGTCG AACGGCAGGA GAGTTGA
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Protein sequence | MKFAQFCQWL ANHAGKPSTF LIALVLIALW AASGPWFHYN DTWQLIVNTS TTIITFLMVF LIQNTQNRDN DIIHVKLDEL IRATKSAEQS VLDLEALDNR EIHKLRKQYQ AMGSGCDPHH QAPAGNQTDD VAREPAALET LLVERQES
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