Gene PputGB1_2984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2984 
Symbol 
ID5870769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3335255 
End bp3336457 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content58% 
IMG OID641548100 
Productalcohol dehydrogenase 
Protein accessionYP_001669212 
Protein GI167033981 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.29856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.505288 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCAC TGACCTACCA CGGAGCAAAC GACGTCAGGG TCGATAACGT TCCTGATCCC 
ATCATCGAGG AAGCAGACGA CATCATCCTC AGGGTCACCG CTACAGCCAT TTGCGGCTCT
GACTTGCATC TCTACCGAGG CAAAATTCCA GAAACCGAAG CGGGTGATAT CTTCGGCCAT
GAGTTCATGG GAATCGTTGA GGACACCGGC AGCGCCGTCA CTAATCTGCA GATCGGCGAC
CGGGTGGTGA TTCCCTTCGT TATCGCTTGC GGCAGCTGCT TCTTCTGTCA GCACGATCTC
TTTGCTGCCT GTGAAACCAC CAACACTGGG CGCGGCTCAA TCAACAACAA GAAAGGCATT
CCGCCAGGCG CGGCGCTGTT TGGATACAGC CACCTGTATG GCGGTATCCC TGGCGGCCAA
GCGGATTACG TGAGGGTGCC CAAGGGTAAC GTCGGCCCGT TCAAAGTGCC CACCGACCTC
ACCGATGACA AAGTGCTTTT CCTGTCAGAT ATTCTGCCGA CCGCTTGGCA GGCGGTCATT
AATGCCGAAA TTGGCCAGGG CTCATCGGTG GCCATTTACG GCGCCGGGCC AGTGGGTTTG
CTGAGTGCCG CCTGCGCGCG AATGCTCGGT GCCCAGACCA TCTTCATGGT CGATGACAAC
GATTACCGCC TGGCATATGC CCAGGACGCT TACGGTGTTG TACCCATCAA CTTCGAGCAG
GACGATGATC CTGCAGACAG CATCATTCGT CAGACGCCAG GTATGCGCGG CGTTGACGCG
GTCATCGACG CGGTCGGCTT CGAGGCTAAA GGCAGCACTG CCGAAACGGT GATGACGGCG
CTGAAGATTG AAGGCAGCAG TGGCAAAGCG CTGCGCCAGA GCATTGCAGC AGTGCGTCGT
GGTGGGGTTG TTAGCGTCCC AGGTGTGTAC GCTGGCTTCA TACACGGGTT CATGTTCGGC
GATGCTTTCG ACAAGGGCCT TACGTTCAAG ATGGGCCAGA CCCATGTCCA GAAATACCTA
CCGGAATTAC TGGAGCACAT CGAAGCAGGA CGCCTGCGAC CAGAACTGAT CGTCACCCAC
CGCCTGGCCC TCGAAGAAGC GGCCATGGGC TACAAGATGT TCGATCAGAA GCAGGACAAC
TGCCGCAAGG TCATCCTCGT GCCAGGCGCT GCGGCGGGCA CTCTAGGCCC TGACTACGTG
TAG
 
Protein sequence
MRALTYHGAN DVRVDNVPDP IIEEADDIIL RVTATAICGS DLHLYRGKIP ETEAGDIFGH 
EFMGIVEDTG SAVTNLQIGD RVVIPFVIAC GSCFFCQHDL FAACETTNTG RGSINNKKGI
PPGAALFGYS HLYGGIPGGQ ADYVRVPKGN VGPFKVPTDL TDDKVLFLSD ILPTAWQAVI
NAEIGQGSSV AIYGAGPVGL LSAACARMLG AQTIFMVDDN DYRLAYAQDA YGVVPINFEQ
DDDPADSIIR QTPGMRGVDA VIDAVGFEAK GSTAETVMTA LKIEGSSGKA LRQSIAAVRR
GGVVSVPGVY AGFIHGFMFG DAFDKGLTFK MGQTHVQKYL PELLEHIEAG RLRPELIVTH
RLALEEAAMG YKMFDQKQDN CRKVILVPGA AAGTLGPDYV