Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2984 |
Symbol | |
ID | 5870769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3335255 |
End bp | 3336457 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641548100 |
Product | alcohol dehydrogenase |
Protein accession | YP_001669212 |
Protein GI | 167033981 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.29856 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.505288 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGCAC TGACCTACCA CGGAGCAAAC GACGTCAGGG TCGATAACGT TCCTGATCCC ATCATCGAGG AAGCAGACGA CATCATCCTC AGGGTCACCG CTACAGCCAT TTGCGGCTCT GACTTGCATC TCTACCGAGG CAAAATTCCA GAAACCGAAG CGGGTGATAT CTTCGGCCAT GAGTTCATGG GAATCGTTGA GGACACCGGC AGCGCCGTCA CTAATCTGCA GATCGGCGAC CGGGTGGTGA TTCCCTTCGT TATCGCTTGC GGCAGCTGCT TCTTCTGTCA GCACGATCTC TTTGCTGCCT GTGAAACCAC CAACACTGGG CGCGGCTCAA TCAACAACAA GAAAGGCATT CCGCCAGGCG CGGCGCTGTT TGGATACAGC CACCTGTATG GCGGTATCCC TGGCGGCCAA GCGGATTACG TGAGGGTGCC CAAGGGTAAC GTCGGCCCGT TCAAAGTGCC CACCGACCTC ACCGATGACA AAGTGCTTTT CCTGTCAGAT ATTCTGCCGA CCGCTTGGCA GGCGGTCATT AATGCCGAAA TTGGCCAGGG CTCATCGGTG GCCATTTACG GCGCCGGGCC AGTGGGTTTG CTGAGTGCCG CCTGCGCGCG AATGCTCGGT GCCCAGACCA TCTTCATGGT CGATGACAAC GATTACCGCC TGGCATATGC CCAGGACGCT TACGGTGTTG TACCCATCAA CTTCGAGCAG GACGATGATC CTGCAGACAG CATCATTCGT CAGACGCCAG GTATGCGCGG CGTTGACGCG GTCATCGACG CGGTCGGCTT CGAGGCTAAA GGCAGCACTG CCGAAACGGT GATGACGGCG CTGAAGATTG AAGGCAGCAG TGGCAAAGCG CTGCGCCAGA GCATTGCAGC AGTGCGTCGT GGTGGGGTTG TTAGCGTCCC AGGTGTGTAC GCTGGCTTCA TACACGGGTT CATGTTCGGC GATGCTTTCG ACAAGGGCCT TACGTTCAAG ATGGGCCAGA CCCATGTCCA GAAATACCTA CCGGAATTAC TGGAGCACAT CGAAGCAGGA CGCCTGCGAC CAGAACTGAT CGTCACCCAC CGCCTGGCCC TCGAAGAAGC GGCCATGGGC TACAAGATGT TCGATCAGAA GCAGGACAAC TGCCGCAAGG TCATCCTCGT GCCAGGCGCT GCGGCGGGCA CTCTAGGCCC TGACTACGTG TAG
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Protein sequence | MRALTYHGAN DVRVDNVPDP IIEEADDIIL RVTATAICGS DLHLYRGKIP ETEAGDIFGH EFMGIVEDTG SAVTNLQIGD RVVIPFVIAC GSCFFCQHDL FAACETTNTG RGSINNKKGI PPGAALFGYS HLYGGIPGGQ ADYVRVPKGN VGPFKVPTDL TDDKVLFLSD ILPTAWQAVI NAEIGQGSSV AIYGAGPVGL LSAACARMLG AQTIFMVDDN DYRLAYAQDA YGVVPINFEQ DDDPADSIIR QTPGMRGVDA VIDAVGFEAK GSTAETVMTA LKIEGSSGKA LRQSIAAVRR GGVVSVPGVY AGFIHGFMFG DAFDKGLTFK MGQTHVQKYL PELLEHIEAG RLRPELIVTH RLALEEAAMG YKMFDQKQDN CRKVILVPGA AAGTLGPDYV
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