Gene PputGB1_2965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2965 
Symbol 
ID5870750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3318561 
End bp3319085 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content62% 
IMG OID641548081 
Producthypothetical protein 
Protein accessionYP_001669193 
Protein GI167033962 
COG category[S] Function unknown 
COG ID[COG4297] Uncharacterized protein containing double-stranded beta helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.760932 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCA TGAATACACA AGATGCCAGC GTGCAGGCCT TGCATTTCGA AGACGACGGC 
GCGACGCCGA ACAGCCGTTT TCCCGTGCTG CTCTACCGGT TGAAGCTCGA TCCGATGGGG
GACATTGCCA GCGAGTTCGA AGCGCTGTTT GCAGCTCACC AATGGACCCC GCTGTGGCGC
GACGGGATCT TCGATTATCA CCACTTTCAC CCTAACGCTC ATGAGGCGCT GGGCATTGCC
TGTGGGCGGG CCCGGTTGAC GCTTGGCGGG GAATATGGGA AAAGCGTGAG CGTGGAGCGG
GGTGATGTGC TGGTGCTGCC AGCAGGCACG GGCCATCGCT GCATCGCGTG CAGCGATAAT
TTCCTGGTGG TCGGCGCCTA TCCCCACGGG CAGGAAGACT ACGACATCCA GCGGCCCGAC
AGTGCAGCGC ACCCGCGCAA TCTCGCGCGC ATCGCTCAGG TGCCGTGCCC TGAACAAGAC
CCGGTCTGCG GTATTCGGGG AATGTTGATG ACGCAATGGC GCTGA
 
Protein sequence
MTLMNTQDAS VQALHFEDDG ATPNSRFPVL LYRLKLDPMG DIASEFEALF AAHQWTPLWR 
DGIFDYHHFH PNAHEALGIA CGRARLTLGG EYGKSVSVER GDVLVLPAGT GHRCIACSDN
FLVVGAYPHG QEDYDIQRPD SAAHPRNLAR IAQVPCPEQD PVCGIRGMLM TQWR