Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2964 |
Symbol | |
ID | 5870749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3318138 |
End bp | 3318518 |
Gene Length | 381 bp |
Protein Length | 126 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641548080 |
Product | hypothetical protein |
Protein accession | YP_001669192 |
Protein GI | 167033961 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.529567 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.9373 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCACGCG GTGACAAGGA CAAGTATACG GACAAGCAGA AACGCACGGC CGAGCACATC GAGCAATCGT ACGAGCACAA GGGCGTGGGT AAGGTCGAAG CTGAAGCGCG CGCCTGGGCC ACCGTGAACA AACAATCCGG TGGCGGTGAG AAGCCGGGAG GCTCGGGGAG CAGGACTTCG TCGCGCGAGA AGCAGACCGC ACGCACAGAT TCAGCCAAGC GCGCCGCCGT GTCTCGCCAG GGGCATTCAC GCACTTCGCG CGCGTCGCTG GAATCGCAAA GCAAGGAAAG CCTTATGAAG GAGGCGCGGA GCAAAGACAT CAAGGGGCGC TCGAGCATGA ACAAGGCCCA GTTGATCGAA GCCCTGCGAA AACAGGGGTG A
|
Protein sequence | MPRGDKDKYT DKQKRTAEHI EQSYEHKGVG KVEAEARAWA TVNKQSGGGE KPGGSGSRTS SREKQTARTD SAKRAAVSRQ GHSRTSRASL ESQSKESLMK EARSKDIKGR SSMNKAQLIE ALRKQG
|
| |