| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2956 |
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| Symbol | |
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| ID | 5870741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3310113 |
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| End bp | 3311027 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641548072 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001669184 |
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| Protein GI | 167033953 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.801513 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGAA ACGACCTGCG TCGCGTAGAC CTCAACCTGC TGATCGTGTT CGAAACGCTG
ATGCACGAGC GCAGCGTGAC CCGTGCCGCG GAAAAACTGT TCCTCGGCCA ACCGGCCATC
AGCGCAGCCT TGTCGCGCTT GCGCAACCTG TTCGACGACC CGCTGTTCGT GCGCACCGGC
CGCAGCATGG AGCCATCGGC ACGGGCCCAC GAGATCTTCG CCCTGCTGTC GCCGGCGCTG
GATTCGATTT CCACGGCGGT CAGCCGCGCC GCCGAATTCG ACCCAGCCAC CAGCAACGCA
GTGTTCCGCA TCGGCCTCTC GGATGACGCC GAGTTCGCCT TGCTGCCGCA ACTGCTCAAG
CGTATTCGCG CCGAAGCCCC TGGTATCGTG CTGGTGGTGC GACGGGTCAA CTACCTGCTG
ATGCCCACGC TGCTGGCCTC GGGCGAGATT TCGGTGGGTG TCAGCTACAC CAGCGAACTG
CCGGCCAATG CAAAGCGCAA GGTGCTGCGC CGCAGCATGC CTAAACTGCT GCGGGCCGAC
AGCGTACCCG GCAACATCAC CCTGGACGAC TTCTGCGCAC GGCCGCATGC ACTGGTGTCG
TTTGCCGGGG ACCTGTCTGG CTTCATCGAT GAAGCCCTGG AAGAACTTGG CCGCAAGCGG
CATGTCGTGC TGGCGGTGCC GCAGTTCAAC GGGCTGGGGA GCTTGCTGGC GGGCACCGAT
ATCGTCGCCA CGGTGCCGGA CTACACCGCA GAGGCGTTGA CGGCGGCGGG CGGGTTGCGC
GCCGAGGACT TGCCCATACC CGTGCGCAGT TTCGAACTGC ACATGGCCTG GCGCGGGGCG
CAGGACAACG ACCCGGCGGA GCGGTGGCTG CGGTCGCGGA TACAGATGTT CTTCGGGGAC
CCCGATAGTC TCTGA
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| Protein sequence | MNRNDLRRVD LNLLIVFETL MHERSVTRAA EKLFLGQPAI SAALSRLRNL FDDPLFVRTG
RSMEPSARAH EIFALLSPAL DSISTAVSRA AEFDPATSNA VFRIGLSDDA EFALLPQLLK
RIRAEAPGIV LVVRRVNYLL MPTLLASGEI SVGVSYTSEL PANAKRKVLR RSMPKLLRAD
SVPGNITLDD FCARPHALVS FAGDLSGFID EALEELGRKR HVVLAVPQFN GLGSLLAGTD
IVATVPDYTA EALTAAGGLR AEDLPIPVRS FELHMAWRGA QDNDPAERWL RSRIQMFFGD
PDSL
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