| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2951 |
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| Symbol | |
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| ID | 5870736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3302833 |
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| End bp | 3304146 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641548067 |
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| Product | mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_001669179 |
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| Protein GI | 167033948 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.364706 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATAC GTATTACCCA CCTGAGCGTT CGTGACATCC GTTTCCCCAC TTCGCTGTCG
CTGGATGGCT CCGACGCCAT GAACAGCGCC CCCGACTATT CGGCGGCCTA CGTGGTGCTG
CACACTGACG CAGCAGCCCT TGAAGGCCAC GGCCTGACCT TCACCATCGG CCGTGGCAAC
GAGATTTGCG CGGCAGCGGT GCAGTCGCTG GCCCCCCTTA TCGTCGGCCT TACCCTTGAA
GAAATCACCG CCGACATGGG CGCTTTCTGG CATCGCTTTA CCGTCAGCGA CAGCCAGCTG
CGCTGGCTGG GCCCGGAAAA GGGCGTGATC CACCTGGCCA CTGCCGCCAT CATCAATGCC
GTATGGGACC TGTGGGCCAA GCACGAGGGC AAGCCCGTCT GGAAGCTGCT GGCCGACATG
ACACCCGAAC AGCTGGTGCA CTGCCTGGAC TTCAGCTACG TCACCGATGT GCTCACACCC
GAAGAAGCCA TCGCCCTGCT GCGCCGTCAG GCACCTGGCA AAGCCCAGCG CGAGGCGCAG
ATGCTGCGTG AAGGCTACCC AGGCTACACC ACTGCACCGG GCTGGCTGGG CTACAGCGAA
GAGAAAATGC GCACGCTGGC CCGCGAGGCC GTGGCAGACG GTTGGACCCA TATCAAGCAG
AAGATCGGTG CCGACCTGGA AGAGGACATC CGCCGCGCCA GCATCCTGCG CGAAGAAATT
GGCTGGGACC GCACCTTGAT GATGGACGCC AACCAGGTGT GGAGCGTGGA GCAGTCTATT
GCCAACATGC GCCGCCTGGC TGCCTTCGAA CCACTGTGGA TCGAAGAGCC GACCAGCCCC
GACGACATCC TCGGCCACGC CACCATACGC CAGCGCATCG CGCCGATTGG CGTGGCCACC
GGTGAGCATT GCCATAACCG GGTGATGTTC AAGCAGATGT TCCAGGCCGG TGCGCTGGAC
TTCTGCCAGC TGGACGCAGC CCGCCTGGGT GGCCTGAACG AAGTGCTGAT CGTACTGCTG
ATGGCGGCCA AGTACGACGT GCCGGTGTGC CCGCACGGCG GTGGCGTCGG GCTGTGCGAA
TATGTGCAGA ACATTGCCTT GTTCGACTAC ATCGCGGTGT CGGCCTCGTT GCACAACCGG
GTGCTGGAGT ATGTCGACCA CCTGCACGAG CACTTCATCG ACCCGGTGGT GATCCGACGC
GGGCGCTACA TGCCGCCACA ACGCCCCGGT TACAGCATTG AAATGCACGC CGAGACCCTG
GAGCGCTACC AGTACCCCAA TGGCGCAGTG TGGCTCGACA TCAACCGCTC CTGA
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| Protein sequence | MSIRITHLSV RDIRFPTSLS LDGSDAMNSA PDYSAAYVVL HTDAAALEGH GLTFTIGRGN
EICAAAVQSL APLIVGLTLE EITADMGAFW HRFTVSDSQL RWLGPEKGVI HLATAAIINA
VWDLWAKHEG KPVWKLLADM TPEQLVHCLD FSYVTDVLTP EEAIALLRRQ APGKAQREAQ
MLREGYPGYT TAPGWLGYSE EKMRTLAREA VADGWTHIKQ KIGADLEEDI RRASILREEI
GWDRTLMMDA NQVWSVEQSI ANMRRLAAFE PLWIEEPTSP DDILGHATIR QRIAPIGVAT
GEHCHNRVMF KQMFQAGALD FCQLDAARLG GLNEVLIVLL MAAKYDVPVC PHGGGVGLCE
YVQNIALFDY IAVSASLHNR VLEYVDHLHE HFIDPVVIRR GRYMPPQRPG YSIEMHAETL
ERYQYPNGAV WLDINRS
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