| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2948 |
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| Symbol | |
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| ID | 5870733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3299076 |
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| End bp | 3300617 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641548064 |
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| Product | galactarate dehydratase |
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| Protein accession | YP_001669176 |
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| Protein GI | 167033945 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2721] Altronate dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.439252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTGA TTGCCAAATC CGGTGACCCA GCCGTCATCC GCCTCAACCC GCTGGACAAT
GTGCTCATTG CTCGCCAGGC CCTGCCGCAA GGGCTGCGCC TGGATGCCGA GGCGATCACC
GTGCGCCAGC CAATTCCCTC GGGCCACAAG CTCGCCACCG AGCGTGTGGA GCAGGGCCAG
CCGCTGCGCC GTTATGGGCA GATCATCGGC TTCGCTTCGC AGGCTATCGA CGCTGGCGAC
CATGTCCATG TGCACAACGT GCAGATGGGC GATTTTGCCC GTGACTATGC CTTTGGTGTC
GATACCCGCA CTCAGCCGGG CAGCACCGCA CAGTTTCAGG GCATCGTGCG CGCCGATGGC
CGGGTCGCTA CCCGCAACTA CATCGGCATT CTTACCTCGG TGAACTGCTC GGCGACCGTG
GCCCGCGCCG TGGCCGACCA TTTTCGCCGT GACATCCATC CCGAGGTGCT GGCCGACTAT
CCGAACATCG ACGGCGTGGT GGCCCTGACC CACGGTGCCG GTTGCGCAGT GGACCCCAGC
GGCGAAGCCC TTGGCCTGCT GCGCCGCACC TTGGCCGGGT ATGCCGTTCA CCCCAACTTC
GCTGCCGTGC TGATCATTGG TTTGGGCTGC GAAACCAACC AGATCGAAAG CCTGCTGGAA
ACCCAGGGCC TGCAGGCCAG CGCGCAACTG CGCGCATTCA CCATCCAGGG GATTGGTGGC
ACGTCGAAAA CCATCGCAGC CGGTATCGCA CAGGTCAAGA CGCTGCTGGC CGAGGCCAAT
CAGGTGCGGC GTCAGCCGGT CAGCGCCCGG CACCTGGTGG TCGGCCTGCA GTGTGGCGGC
TCCGATGGTT ACTCGGGGAT TACCGCCAAC CCGGCATTGG GCAATGCTGT CGACCGCCTG
GTGGCAGCCG GTGGCACCGC GATCCTCTCC GAGACCCCGG AAATCTACGG TGCCGAGCAC
TTGCTGACGC GCCGCGCGGT AAGCCGTGAG GTGGGCGAAA AGCTGGTGGC GCGCATCCGC
TGGTGGGAAG ACTACTGCCA GCGCATGAAC GCCGAACTGA ACAACAACCC CTCGGCCGGC
AACAAGGCAG GGGGGCTGAC CACCATCCTC GAGAAGTCCC TGGGTGCGGT GGCCAAGGCT
GGCTCCAGCA ACCTGGTCGA TGTGTACCAG TACGCGGAAG CCGTGCGTGC CCAGGGCCTG
GTGTTCATGG ACACCCCTGG CTACGACCCG GTATCGGCCA CCGGTCAGGT GGCCGGGGGG
GCCAACCTGA TCGCCTTCAC CACCGGCCGT GGTTCGGCCT ACGGCTGTGC CCCGGCACCG
TCGATCAAGC TGGCGACCAA CAACCGGGTG TTCGAGCACC AGCAAGAGGA CATGGACGTC
AATTGCGGTG GCATCGCCGA CGGCTCTACC AGTATCGAGG AGCGCGGCGC ATTCATCTTC
GAACAGATGC TGCGCATTGC CTCCGGAGCA CGCAGCAAGA GCGAACAGCA CGGCTATGGA
CAGAACGAAT TCGTGCCCTG GCAGATTGGG GCAGTGACCT GA
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| Protein sequence | MQLIAKSGDP AVIRLNPLDN VLIARQALPQ GLRLDAEAIT VRQPIPSGHK LATERVEQGQ
PLRRYGQIIG FASQAIDAGD HVHVHNVQMG DFARDYAFGV DTRTQPGSTA QFQGIVRADG
RVATRNYIGI LTSVNCSATV ARAVADHFRR DIHPEVLADY PNIDGVVALT HGAGCAVDPS
GEALGLLRRT LAGYAVHPNF AAVLIIGLGC ETNQIESLLE TQGLQASAQL RAFTIQGIGG
TSKTIAAGIA QVKTLLAEAN QVRRQPVSAR HLVVGLQCGG SDGYSGITAN PALGNAVDRL
VAAGGTAILS ETPEIYGAEH LLTRRAVSRE VGEKLVARIR WWEDYCQRMN AELNNNPSAG
NKAGGLTTIL EKSLGAVAKA GSSNLVDVYQ YAEAVRAQGL VFMDTPGYDP VSATGQVAGG
ANLIAFTTGR GSAYGCAPAP SIKLATNNRV FEHQQEDMDV NCGGIADGST SIEERGAFIF
EQMLRIASGA RSKSEQHGYG QNEFVPWQIG AVT
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