| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2935 |
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| Symbol | ureC |
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| ID | 5870721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3284243 |
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| End bp | 3285946 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641548053 |
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| Product | urease subunit alpha |
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| Protein accession | YP_001669165 |
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| Protein GI | 167033934 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0804] Urea amidohydrolase (urease) alpha subunit |
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| TIGRFAM ID | [TIGR01792] urease, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.19721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGTA TTTCCCGCCA GGCCTATGCC GACATGTTCG GCCCTACCGT GGGCGACCGC
GTGCGTCTGG CCGATACCGC ACTGTGGGTT GAGGTAGAGA AGGACTTCAC GGTTTATGGC
GAAGAGGTGA AGTTCGGCGG CGGCAAGGTC ATCCGCGATG GCATGGGGCA GGGCCAGATG
CTGGCTGCCG AGGCCATGGA CCTGGTGCTG ACCAATGCCC TGATCATCGA CCACTGGGGC
ATCGTCAAAG CCGACATCGG TATCAAGCAC GGGCGCATCG CGGTGATCGG CAAGGCCGGC
AACCCCGATG TGCAGCCAGG GGTGAACGTG CCGGTCGGGC CGGGGACCGA AGTAATCGCG
GCCGAGGGCA AGATCGTCAC CGCCGGTGGG GTGGACTCGC ATATCCACTT CATTTGCCCG
CAGCAGGTGG ACGAGGCCCT GAACAGCGGT GTCACCACGT TCATCGGCGG CGGCACCGGG
CCTGCCACCG GCACCAATGC CACCACTTGC ACGCCGGGCC CCTGGTACCT GGCGCGCATG
CTGCAGGCCG CCGACAGCCT GCCGATCAAC ATCGGTTTGC TCGGCAAGGG CAACGCCTCG
CGGCCTGAAG CGCTGCGCGA ACAGATCGCG GCCGGTGCAG TTGGCCTCAA GCTGCACGAG
GACTGGGGCT CGACGCCAGC GGCCATCGAC TGCTGCCTGG GTGTGGCCGA GGAAATGGAC
ATCCAGGTCG CGATTCACAC CGACACCCTC AATGAGTCGG GCTGCATCGA AGACACCTTG
GCGGCCATTG GCGACCGCAC CATCCACACC TTTCACACCG AGGGGGCCGG TGGCGGCCAT
GCACCGGACA TCATCCGCGC GGCGGGGCAG GCCAACGTGC TGCCGTCCTC GACCAACCCG
ACCCTGCCGT ACACGATCAA CACCGTGGAC GAGCACCTGG ACATGCTCAT GGTCTGCCAT
CACCTGGACC CGAGCATCGC CGAGGACGTG GCCTTTGCCG AATCGCGCAT CCGCCGCGAG
ACCATCGCCG CCGAGGACAT CCTCCACGAC ATGGGCGCCT TTGCCATGAC CTCGTCCGAC
TCCCAGGCCA TGGGCCGGGT TGGCGAAGTG GTGCTGCGCA CCTGGCAGGT CGCGCACCAG
ATGAAACTAC GCCGTGGGCC GTTGGCACCG GACACCTATT ACAGCGACAA CTTCCGGGTC
AAACGCTACA TCGCCAAGTA CACCATCAAC CCGGCACTCA CCCATGGCAT CGGCCACGAA
GTGGGCTCGG TGGAGGTGGG CAAGCTGGCC GACCTGGTGC TGTGGTCGCC GGCTTTCTTC
GCGGTCAAAC CGGCCCTGGT GCTCAAGGGC GGGATGATTG TCACGGCGCC GATGGGCGAC
ATCAACGGCT CCATTCCAAC GCCACAGCCG GTGCACTACC GGCCGATGTT CGGCGCGTTG
GGCGCGGCAC GCCATGCCAC GCGCATGACC TTTCTGCCCC AGGCTGCCAT GGACCGTGGC
CTGGCCGAGG AACTGAACCT GCGCAGCCTG ATTGGCGTGG TCAACGGCTG CCGTCGGGTA
CGCAAGCCCG ACATGGTCCA CAACACCCTG CAGCCCCTGA TAGAAGTCGA TGCGCAGACC
TACCAGGTGC GTGCCGATGG TGAGCTGCTG GTGTGCGAGC CGGCCAGCGA ACTGCCGCTG
GCCCAGCGTT ACTTTCTGTT CTGA
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| Protein sequence | MSRISRQAYA DMFGPTVGDR VRLADTALWV EVEKDFTVYG EEVKFGGGKV IRDGMGQGQM
LAAEAMDLVL TNALIIDHWG IVKADIGIKH GRIAVIGKAG NPDVQPGVNV PVGPGTEVIA
AEGKIVTAGG VDSHIHFICP QQVDEALNSG VTTFIGGGTG PATGTNATTC TPGPWYLARM
LQAADSLPIN IGLLGKGNAS RPEALREQIA AGAVGLKLHE DWGSTPAAID CCLGVAEEMD
IQVAIHTDTL NESGCIEDTL AAIGDRTIHT FHTEGAGGGH APDIIRAAGQ ANVLPSSTNP
TLPYTINTVD EHLDMLMVCH HLDPSIAEDV AFAESRIRRE TIAAEDILHD MGAFAMTSSD
SQAMGRVGEV VLRTWQVAHQ MKLRRGPLAP DTYYSDNFRV KRYIAKYTIN PALTHGIGHE
VGSVEVGKLA DLVLWSPAFF AVKPALVLKG GMIVTAPMGD INGSIPTPQP VHYRPMFGAL
GAARHATRMT FLPQAAMDRG LAEELNLRSL IGVVNGCRRV RKPDMVHNTL QPLIEVDAQT
YQVRADGELL VCEPASELPL AQRYFLF
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