Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2933 |
Symbol | |
ID | 5870719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3283171 |
End bp | 3283716 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641548051 |
Product | HupE/UreJ protein |
Protein accession | YP_001669163 |
Protein GI | 167033932 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2370] Hydrogenase/urease accessory protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.629521 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA CTTTCGCCCT GTTTCTGCTG ATGCTGGCGC TGCCAGCCTT TGCCCACCCT GGTCATGACA GCAACCCGCT GCAGGACGGC CTGTTGCACC CGCTTACCGG GCTCGATCAC TTGCTGATGC TGCTGGGCAC TGGGGTGCTT GCCGCGTTGA CTCGGCGCAG CCTGACGTTG CCCCTGGCTA CGCTGGCTGC AATGTTCGCA GGCGCTGTGT GCGGGCACCT GTTCGGCGAT GTGCTGGGCA TGGAAGCCCT GATTGCCGCG TCGCTGCTGG TGGCTGCCGG GGCGGTGCTG CTGCCGAGCC GCCAGTTGCT GCTGGCAATG GCCATGCCGG TGTTTGCCTT GTTCCATGGC TGGGCCCACG GTGTAGAAGC CACGCCAAGC GCGTTCTGGC AGTTCAGTGC TGGCTTCGTC ACCGTCAGCG GTCTGCTGCT GGCGGCCGGC TTCGCGGTCG GTTGCCTGCT GCGCCGCCAC AGCGGCCTGC AAAAGGCTTT TGGCGGTGGC CTGCTGGCCG GCGCCGCGTT GGTACTGGCC GGTTGA
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Protein sequence | MKKTFALFLL MLALPAFAHP GHDSNPLQDG LLHPLTGLDH LLMLLGTGVL AALTRRSLTL PLATLAAMFA GAVCGHLFGD VLGMEALIAA SLLVAAGAVL LPSRQLLLAM AMPVFALFHG WAHGVEATPS AFWQFSAGFV TVSGLLLAAG FAVGCLLRRH SGLQKAFGGG LLAGAALVLA G
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