Gene PputGB1_2902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2902 
Symbol 
ID5870688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3254883 
End bp3255446 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content64% 
IMG OID641548020 
ProductTetR family transcriptional regulator 
Protein accessionYP_001669132 
Protein GI167033901 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.465511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTACT CCAACGAACA CAAACAGCAA ACCCGCGACC GGTTGCTGGC CAGCAGCGGC 
GCGCTGGCCA AACGCGGGGG GTTCGCCAGT ACCGGCGTGG CAGGGCTGAT GAAGGCGATT
GGCCTGACCG GCGGTGCCTT CTACAACCAC TTCCCGTCAA AGGACGACCT GTTCACCGAG
GTAGTACGCC AGGAGCTGTG CAACAGCCCG CTGACACGCC TGACCAGCCA AGGTGCCAAC
CGCGAGCGCC TGGGCCGCTG CCTGCAGCAG TACCTGAGCC TGGCCCATCT GCACAATGCC
GAGGGTGGCT GCCCACTGCC GCCACTGGGA GTGGAAATTG CCCGCGCCGA AGCACCAGTG
CGTGAAGTGG CTGAGCACTG GCTGCTGGAA CTGCACCGTG CCTGGAGCAC AACCCTGGAG
GATGAACAAT TGGCCTGGGT GCTGATCAGC CAGTGCGTCG GCGCACTGCT GGTCGGGCGC
ATGTTGGCCA GTGAAAGCGT ACAAGCGCAG GTACTGGACG CCAGCCGCCA ATTTGTCGAA
CAGGCCTTGC ATGAGGCGGA TTAG
 
Protein sequence
MRYSNEHKQQ TRDRLLASSG ALAKRGGFAS TGVAGLMKAI GLTGGAFYNH FPSKDDLFTE 
VVRQELCNSP LTRLTSQGAN RERLGRCLQQ YLSLAHLHNA EGGCPLPPLG VEIARAEAPV
REVAEHWLLE LHRAWSTTLE DEQLAWVLIS QCVGALLVGR MLASESVQAQ VLDASRQFVE
QALHEAD