Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2879 |
Symbol | |
ID | 5870665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3232176 |
End bp | 3233879 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641547997 |
Product | glutaminyl-tRNA synthetase |
Protein accession | YP_001669109 |
Protein GI | 167033878 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
TIGRFAM ID | [TIGR00440] glutaminyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGC CCACTGCCGA CAACGCGCCC AACGCCGCTG CCAAAGGCGC CCCCGCTGTC CCTGCGAACT TCCTGCGGCC GATCATCCAG GCCGACCTGG ACTCGGGCAA GCACAGCAGC ATCGTCACCC GTTTCCCGCC GGAGCCCAAT GGTTATCTGC ACATCGGCCA CGCCAAGTCG ATCTGCGTCA ACTTTGGCCT GGCAAAGGAA TTCGGCGGCG TCTGCCACCT GCGTTTCGAC GATACCAACC CGGCCAAGGA AGACCAGGAG TACATCGACG CCATCCAGAA TGATGTCAAG TGGCTGGGTT TCGACTGGGC CGGCGACGTG CGTTATGCCT CCGACTACTT CGACCAGTTG CACGACTGGG CGGTCGAGCT GATCAAGCAG GGCAAGGCCT ACGTCTGCGA CCTGACCCCT GAGCAAGCCA AGGAATACCG CGGCACCCTC AAGGAGCCGG GCAAGAACAG CCCGTTCCGC GAGCGCAGCG TGGAAGAAAA CCTCGACCTG TTCGCCCGCA TGAAGGCCGG CGAGTTCAAG GACGGCGAGC GCGTGCTGCG GGCCAAGATC GACATGGCCT CGCCGAACAT GAACCTGCGT GACCCGATCC TGTACCGCAT CCGCCATGCC CACCATCACC AGACCGGTGA CAAATGGTGC ATCTACCCCA ACTACGACTT TACCCACGGC CAGTCGGACG CCATCGAGGG CATTACCCAC TCGATCTGCA CCCTGGAATT CGAAGGGCAT CGTCCGCTGT ACGACTGGTT CCTCGACAAC CTGCCGGTGC CGGCACATCC GCGCCAGTAC GAGTTCAGCC GCCTGAACCT GAACTACACC ATCACCTCCA AGCGCAAGCT CAAGCAGTTG GTGGACGAGA AACACGTCGA CGCCTGGGAC GACCCACGCA TGTCGACCCT GTCGGGCTTC CGTCGCCGTG GCTACACCCC GGCCTCGATC CGCAACTTCT GCGAAATGAT CGGCACCAAC CGTTCCGACG GCGTGGTCGA CATGTCGATG CTGGAGTTCA GCATTCGTGA CGACCTGGAC CGCACCGCAC CGCGCGCCAT GTGCGTGCTG CGCCCGCTGA AAGTGGTCAT CACCAACTAC CCCGAAGGCC AGGTCGAGCA GCTTGAGCTG CCACGTCACC CGAAGGAAGA CATGGGTGCG CGCGTGCTGC CGTTCTCCCG CGAGCTGTAC ATTGACCGCG ACGACTTCAT GGAAGAGCCG CCGAAGGGCT ACAAGCGCCT GGAACCGGCT GGTGAAGTGC GCCTGCGTGG CAGCTACGTG ATCCGCGCCG ACGAAGCCAT CAAGGATGCC GACGGCAACA TCGTCGAGCT GCGTTGCTCG TACGACCCGG ACACCCTGGG CAAGAACCCT GAAGGCCGCA AGGTCAAAGG CGTGATCCAC TGGGTGCCGG CCGAGGGCAG CGTCGAGTGC GAAGTGCGCC TGTACGACCG CCTGTTCCGC TCGCCGAACC CGGAAAAGAC CGAGGAGGGC GGCAGCTTCC TGGACAACAT CAACCCTGGT TCGCTGCAAG TGCTCAGCGG TTGCCGTGCC GAGCCGTCGC TGGCGCAGGC GCAGCCCGAG GACCGCTTCC AGTTCGAGCG CGAAGGCTAC TTCTGCGCCG ACCTGAAAGA CAGCCAGCCG GGCCGCCCGG TGTTCAACCG CACTGTCACC CTGCGTGACT CCTGGGGCAG CTGA
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Protein sequence | MSKPTADNAP NAAAKGAPAV PANFLRPIIQ ADLDSGKHSS IVTRFPPEPN GYLHIGHAKS ICVNFGLAKE FGGVCHLRFD DTNPAKEDQE YIDAIQNDVK WLGFDWAGDV RYASDYFDQL HDWAVELIKQ GKAYVCDLTP EQAKEYRGTL KEPGKNSPFR ERSVEENLDL FARMKAGEFK DGERVLRAKI DMASPNMNLR DPILYRIRHA HHHQTGDKWC IYPNYDFTHG QSDAIEGITH SICTLEFEGH RPLYDWFLDN LPVPAHPRQY EFSRLNLNYT ITSKRKLKQL VDEKHVDAWD DPRMSTLSGF RRRGYTPASI RNFCEMIGTN RSDGVVDMSM LEFSIRDDLD RTAPRAMCVL RPLKVVITNY PEGQVEQLEL PRHPKEDMGA RVLPFSRELY IDRDDFMEEP PKGYKRLEPA GEVRLRGSYV IRADEAIKDA DGNIVELRCS YDPDTLGKNP EGRKVKGVIH WVPAEGSVEC EVRLYDRLFR SPNPEKTEEG GSFLDNINPG SLQVLSGCRA EPSLAQAQPE DRFQFEREGY FCADLKDSQP GRPVFNRTVT LRDSWGS
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