| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2869 |
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| Symbol | |
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| ID | 5870655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3220078 |
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| End bp | 3221580 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641547987 |
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| Product | proline/glycine betaine transporter |
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| Protein accession | YP_001669099 |
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| Protein GI | 167033868 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.779862 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCTC GCAAGAAAAG CGTCCAGCCA ATCGGCCTGA AGGACATTAC CATCGTCGAC
GACGCCAAGA TGAAGAAGGC GATCACCGCC GCTGCGCTGG GTAACGCCAT GGAGTGGTTC
GACTTTGGCG TGTACGGCTT CGTCGCCTAC GCCCTGGGCA AGGTGTTCTT CCCCAATGCC
GACCCCAGCG TGCAGATGAT CGCGGCCCTG GCCACCTTCT CGGTGCCGTT CCTGATCCGG
CCATTGGGCG GGTTGTTCTT CGGCGCCTTG GGCGACAAGT TCGGGCGGCA GAAAATCCTC
GCTGCGACCA TCGTGATCAT GTCGCTCAGC ACCTTCGCCA TCGGCCTTAT ACCGTCCTAC
GCCAGCATCG GCATCTGGGC GCCGATACTG TTGTTGCTGG CCAAGATGGC CCAGGGTTTT
TCAGTGGGGG GCGAGTACAC CGGTGCCTCG ATCTTCGTTG CCGAATACGC CCCTGACCGC
AAGCGCGGTT TTCTCGGTAG CTGGCTGGAC TTCGGCTCGA TTGCCGGGTT TGTGCTAGGT
GCTGGAGTGG TGGTGCTGAT ATCCACCATT CTCGGTGAAG AGAAGTTCCT TGAATGGGGC
TGGCGGCTGC CGTTCTTCCT GGCCCTGCCG CTGGGCATCA TCGGCCTTTA CCTGCGCCAT
GCGCTGGAAG AGACACCCGC GTTTCAGCAG CATGTCGACA AGCTGGAGCA GGGCGACCGT
GAAGGCCTGG CTTCTGGGCC CAAGGTGTCG TTCAAGGAGG TGGCTACCCA GCACTGGCGC
AGCCTGGTGA CCTGCATTGG TGTGGTAATC GCCACCAACG TCACCTACTA CATGCTGCTC
ACCTACATGC CCAGCTACCT GTCGCACAAC CTGCACTACA GCGAAGACCA TGGTGTGCTG
ATCATCATCG CGATCATGGT CGGCATGCTG TTCGTGCAGC CGATGATCGG CCTGCTCAGC
GACAAGTTTG GCCGTCGGCC ATTCATCATC GTTGGCAGTG TTGGCCTGTT CGCCCTGGCC
ATTCCGGCAT TCATGTTGAT CAACAGCGGC GTGCTGGGGG TGATTTTCGC CGGGCTGCTG
ATCATTGCTG TGCTGCTGAA CTTTTTCATC GGCGTGATGG CCTCCACGTT GCCAGCGATG
TTCCCTACGC ACATCCGCTA CAGCGCCCTG GCCGCTGCAT TCAACATTTC GGTGCTGATA
GCCGGGCTTA CTCCGACCCT CGCTGCCTGG CTGGTGGAGA GTACCGGCGA CCTCTACATG
CCGGCCTACT ACCTGATGGT AATCGCCGCC ATTGGCCTGC TGACCGGCCT GACCATGAAG
GAAACCGCCA ACAAGCCGCT GCGAGGCGCG GCACCGGCGG CATCGGACAT CGAGGAAGCG
CGTGAGCTGC TGCAGGAGCA CCACGACAAC ATCGAGCAGA AGATCGAGGA CATCGATGCG
CAAATCGCCG AACTGGAAGC CAAGCGCGAG ACGCTGGCCC AGCAGCACCC GCGCATCGAA
TGA
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| Protein sequence | MKPRKKSVQP IGLKDITIVD DAKMKKAITA AALGNAMEWF DFGVYGFVAY ALGKVFFPNA
DPSVQMIAAL ATFSVPFLIR PLGGLFFGAL GDKFGRQKIL AATIVIMSLS TFAIGLIPSY
ASIGIWAPIL LLLAKMAQGF SVGGEYTGAS IFVAEYAPDR KRGFLGSWLD FGSIAGFVLG
AGVVVLISTI LGEEKFLEWG WRLPFFLALP LGIIGLYLRH ALEETPAFQQ HVDKLEQGDR
EGLASGPKVS FKEVATQHWR SLVTCIGVVI ATNVTYYMLL TYMPSYLSHN LHYSEDHGVL
IIIAIMVGML FVQPMIGLLS DKFGRRPFII VGSVGLFALA IPAFMLINSG VLGVIFAGLL
IIAVLLNFFI GVMASTLPAM FPTHIRYSAL AAAFNISVLI AGLTPTLAAW LVESTGDLYM
PAYYLMVIAA IGLLTGLTMK ETANKPLRGA APAASDIEEA RELLQEHHDN IEQKIEDIDA
QIAELEAKRE TLAQQHPRIE
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