| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2860 |
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| Symbol | |
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| ID | 5870646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3207217 |
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| End bp | 3208188 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641547978 |
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| Product | urea amidolyase related protein |
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| Protein accession | YP_001669090 |
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| Protein GI | 167033859 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1984] Allophanate hydrolase subunit 2 |
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| TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0238503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.498047 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAGG TGCTCAAACC CGGCCTCGCG ACTTCCGTGC AGGACCTGGG CCGCGAAGGT
TACTACCACC TGGGCATCCC ACCGTCCGGC GCACTCGACC AATACGCCTT GAGCGCGGCC
AACCACCTGG TGGGCAACCC GGCCGGCGCT GCGGGCCTGG AATGTGCGTT GGTGGGGCCG
GAGCTGGAGT TTCAGCAGGA CGCACTGGTG GCCGTTTGCG GTGCGCAGAT GCCCGCGTTG
CTCGATGGCC GCGAGCAGCG GCCGGATACG GCGTTTGCCG TGCGCGCCGG GCAAGTGTTG
CGTTTCGGTT TTCCTACCGC AGGTGCTCGG GCCTACCTGG CTGTGGCAGG CGGCATCGAC
GTGCCCGAAG TACTGGGTAG CCGTTCCACC TACGCGCTGG GGGCCTTGGG CGGCTTCCAT
GGGCGCAAGT TGATGGCGGG CGACCTGCTA CCGGTCGGCG TGCCCAGCGG CAAGACCCGT
GCCGGTGCAA GCCTGCCGAT GGCCTTGCGT CAGGCCCTGG GTGGCGAGGT GGTGTTGCGG
GTGGTGCCTG GGCTGTACTT CCACCGCCTG ACCGCACCTG CGGCACAAAG CTTTTTCACC
GAAGCCTGGA CAGTCGGCTC CGAGGCGGAC CGTATTGGCT ATCGCTACAA AGGCGGCAGT
GCCTTGAGCT TCCAGCCACG GGAGCAGCCG TTCGGTGCTG GGTCGGACCC GTCGAACATC
GTCGACAGCT GCTACCCAAT CGGCTCGATC CAGGTGCCGG CGGGGTTGGA ACCGATCATC
CTGCACCGCG ATGCTGTGTC CGGTGGCGGT TACGCCATGA TCGGCACGGT GATCAGTGCC
GACCTTGATT TGATCGGGCA GATGCAGCCT AACCAGCAGG CACGGTTCCT GGCGGTTAGC
CTGGAGCAGG CGCTGGAGGC GCGGCGGTCG TACAAGAAGA AGCTTGGTTG CCTGGATAGG
CTTTTCAACT GA
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| Protein sequence | MIKVLKPGLA TSVQDLGREG YYHLGIPPSG ALDQYALSAA NHLVGNPAGA AGLECALVGP
ELEFQQDALV AVCGAQMPAL LDGREQRPDT AFAVRAGQVL RFGFPTAGAR AYLAVAGGID
VPEVLGSRST YALGALGGFH GRKLMAGDLL PVGVPSGKTR AGASLPMALR QALGGEVVLR
VVPGLYFHRL TAPAAQSFFT EAWTVGSEAD RIGYRYKGGS ALSFQPREQP FGAGSDPSNI
VDSCYPIGSI QVPAGLEPII LHRDAVSGGG YAMIGTVISA DLDLIGQMQP NQQARFLAVS
LEQALEARRS YKKKLGCLDR LFN
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