| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2852 |
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| Symbol | |
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| ID | 5870638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3196715 |
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| End bp | 3197935 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641547970 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_001669082 |
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| Protein GI | 167033851 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4277] Predicted DNA-binding protein with the Helix-hairpin-helix motif |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0978513 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTCA TTGCCAAACT CGGCATCCTC GCCGACGCCG CCAAGTACGA CGCTTCCTGC
GCCAGCAGCG GTGCGCCCAA GCGTAACTCG CGCGGTGCCG ACAGCCTGGG GGCCACCAAT
GGCATGGGCA TCTGTCACAG CTACACCCCC GACGGCCGCT GCGTATCGCT GCTCAAGGTG
TTGCTCACCA ACTTCTGCCT GTACGACTGC CAGTACTGTG TCAACCGCCG CTCCAGCAAC
GTGCCACGCG CGCGCTTCAG CCCCGAGGAA GTGGTACGCC TGACCCTGGA CTTCTACCGG
CGCAACTGCA TCAGCGGCTT GTTCCTCAGC TCTGGCATCA TCCGCTCGGC GGACTACACC
ATGGAGCAGC TGATCCGCGT GGCCCGGCTG TTGCGCGAAG AACACAACTT CCGCGGCTAC
ATTCATCTCA AGACAATTCC CGACGCCGAC CCGCTGCTGA TCGAACAGGC CGGGCGCCTG
GCCGACCGCC TCAGCGTCAA CATCGAGCTG CCGACCGACG CCAGCCTCAA ACGCCTGGCG
CCGGAAAAAC AGGCGCACAC CATTCGCCAG GCCATGGGCG TGATTCACCA AGGCCAGCAA
GCCGTGGCCA ACGAGCCCAA GGCGCCACGC TTTACCCCGG CGGGGCAAAG CACCCAGGTC
ATCGTCGGCG CCGACAGCAC CGACGACAGC ACCTTGCTGC GCAATGCCGA GTCGCTTTAC
CAGGGCTACG GCCTCAAGCG CGTGTACTAC TCCGCCTTCA GCCCGATCCC CGACAGCCCA
GGCAGCGTGC CCCTCGCCGC ACCTCCGCTG CTGCGCGAAC ACCGCCTGTA TCAGGCCGAC
TTCCTGCTGC GTGGCTATGG CTACAAGGCT GGCGAGCTGC TGGGCCAGAG CGGTAACCTG
GCCCTGGACA TCGACCCCAA GCTGGCCTGG GCGCTGGCCA ACCGCGAGGT CTTCCCGCTG
GATGTGAACC GCGCCGAGCC AGCGTTACTG GCACGCATCC CCGGCATCGG CCTGCGCAGT
GTGCAACGCC TGGTCGCCCT GCGCCGGGAA CGGCGTATCC GCTATGACGA CCTGATCCAG
CTGCGTTGCG TGCTGGACAA GGCTCGGCCG TTCATCGTCA CCAGCGACTA CCGCCCGGCC
CAAGCCGAAC TGCGCAGCGG CCTGCTAAGG GCGCGTTTGC GTGAGCCGCA AGCACCGGTG
CAGATGGGGT TATGGGGGTG A
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| Protein sequence | MQLIAKLGIL ADAAKYDASC ASSGAPKRNS RGADSLGATN GMGICHSYTP DGRCVSLLKV
LLTNFCLYDC QYCVNRRSSN VPRARFSPEE VVRLTLDFYR RNCISGLFLS SGIIRSADYT
MEQLIRVARL LREEHNFRGY IHLKTIPDAD PLLIEQAGRL ADRLSVNIEL PTDASLKRLA
PEKQAHTIRQ AMGVIHQGQQ AVANEPKAPR FTPAGQSTQV IVGADSTDDS TLLRNAESLY
QGYGLKRVYY SAFSPIPDSP GSVPLAAPPL LREHRLYQAD FLLRGYGYKA GELLGQSGNL
ALDIDPKLAW ALANREVFPL DVNRAEPALL ARIPGIGLRS VQRLVALRRE RRIRYDDLIQ
LRCVLDKARP FIVTSDYRPA QAELRSGLLR ARLREPQAPV QMGLWG
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