| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2846 |
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| Symbol | |
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| ID | 5870632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3190146 |
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| End bp | 3191483 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641547964 |
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| Product | nucleotide sugar dehydrogenase |
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| Protein accession | YP_001669076 |
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| Protein GI | 167033845 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
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| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.115045 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTCA CGGTTTTCGG TACTGGCTAT GTCGGCCTCA CCCAGGCAGT GTGCCTGGCC
CAGGTGGGCC ATTCGGTGTT GTGCATGGAT GTCGATGCCG AACGAGTTGC CAACCTCAGT
GCAGGCCATT GCCCGATCTT CGAGCCCGGC CTTGCGCCGC TGCTGGAGAA AAACCTGGCT
TGCGGTCGCC TGCGTTTCAC CACGGATGCC AGGGCAGCAG TTCACTACGC CAGGCTGCAG
TTCATCGCAG TCGGCACTCC GCCACAAGCC GATGGCAGCG CCGACCTGAA GCACGTTTTT
GCCGTGGTCG ACAGCATCCT CGAACATGCC GACGGCACCA AGGTGATCGT CAACAAATCC
ACCGCGCCAG TCGGCACGGT GCACCGCATC AAATCGCGTA TAGCCCAGGC CGTGGCCGAC
ACCAGTCGTT TCCAGGTCAT CAGCAACCCG GAATTTCTCA AGGAAGGCTC GGCCGTGGAT
GATTGCATGC GTCCGGACCG CATCATCATC GGCGGCGCCG AACCGGCCGA AGTGGAATTG
CTGCGCGAAC TGTACCTGCC GTTCAGCCGC AACCGCGAAA AGCTTATGAC CATGGATGCG
CGCAGCGCCG AGCTGACCAA GTATGCGGCC AACTGCATGC TGGCGACCAA GATCTCCTTC
ATCAACGAAA TCGCCAACCT GGCCGAGTAC CTGGGGGCCG ATATCGAGAT GGTGCGCCGT
GGCATCGGCT CCGACCCGCG CATTGGCTAT GACTTCATCT ACGCCGGTTG CGGCTTTGGC
GGCTCGTGCT TCCCCAAGGA CTTGCAAGCC CTGCGCCGCA GCGCCGAGGC TGAAGGCTTC
GAGCCGCAGT TGCTGCGTGC GGTGGAGTCG GTCAACGAAC ATCAAAAGGG CCGGTTGTTC
AGCAAGATCC AGCGGCATTA TCCCGGTGGC CTGCGGGGCA AGGTATTTGC CTTGTGGGGG
TTGTCGTTCA AGCCCAACAC CAACGACATA CGCGAGGCCT CCAGCCGGGT CCTGCTGGAG
GCCCTGTGGG CCGCTGGCGC GCGGGTACAG GCCCATGACC CGCAGGCGAT GGAAGAAATC
CTGCGGCATT ACGGCCCGCG CGCCGACCTG CAACTGGTGC CCTGCAAGGA CGATGCACTG
GAGGGTGCCG ATGCGCTGGT AATCATCACC GAGTGGCAGG ACTACCGCGT GCTCAACCTG
GAAAAAGTGC CGCAACAATT GGCCGACCGA GTGGTATTCG ACGGGCGCAA CCTGTTCGAG
CCCGAGCACA TGGCCACCGC CGGCCTCACC TATTACGGTA TTGGTCGCGG CCAGGTGCAG
CCAGCATGCC CGTACTGA
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| Protein sequence | MKVTVFGTGY VGLTQAVCLA QVGHSVLCMD VDAERVANLS AGHCPIFEPG LAPLLEKNLA
CGRLRFTTDA RAAVHYARLQ FIAVGTPPQA DGSADLKHVF AVVDSILEHA DGTKVIVNKS
TAPVGTVHRI KSRIAQAVAD TSRFQVISNP EFLKEGSAVD DCMRPDRIII GGAEPAEVEL
LRELYLPFSR NREKLMTMDA RSAELTKYAA NCMLATKISF INEIANLAEY LGADIEMVRR
GIGSDPRIGY DFIYAGCGFG GSCFPKDLQA LRRSAEAEGF EPQLLRAVES VNEHQKGRLF
SKIQRHYPGG LRGKVFALWG LSFKPNTNDI REASSRVLLE ALWAAGARVQ AHDPQAMEEI
LRHYGPRADL QLVPCKDDAL EGADALVIIT EWQDYRVLNL EKVPQQLADR VVFDGRNLFE
PEHMATAGLT YYGIGRGQVQ PACPY
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