| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2840 |
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| Symbol | |
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| ID | 5870626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3182760 |
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| End bp | 3184463 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641547958 |
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| Product | amidase |
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| Protein accession | YP_001669070 |
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| Protein GI | 167033839 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.845019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.475374 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAGG TAACCGAGGT TTCCATTGCC GCGCTGCGCG ACGCGCTCGA GTCGGGCCGC
ACGACGGCGG TCGAGCTGGT CAAGGCCTAT CTGGCACGTA TCGATGCCTA CGATGGCGCC
GACACGGCCA CGGCCCTGAA CGCCGTAGTG GTACGCAACC CGGAGGCGCT GAAAGAGGCC
GAGGCCTCCG ACGCCCGCCG TGCCAAGGGC CAGGTGCTGA GCCCACTGGA CGGCATTCCC
TACACTGCCA AAGACAGCTA CCTGGTCAAG GGCCTGACTG CCGCTTCCGG CAGCCCTGCC
TTCAAGAACC TGGTCGCCCA GCGCGACGCC TTCACCATCG AGCGCCTGCG CGCCGCGGGT
GCCGTGTGCC TGGGCAAGAC CAACATGCCG CCCATGGCTA ACGGTGGCAT GCAGCGCGGT
GTCTATGGCC GCGCCGAAAG CCCTTACAAC GCCAACTACC TGACCGCGCC GTTCGCCTCG
GGCTCGTCCA ACGGCGCCGG CACCGCCACC GCCGCCAGCT TCAGTGCCTT CGGCCTGGCC
GAAGAAACCT GGTCCAGCGG CCGTGGCCCG GCGTCCAACA ACGGCCTGTG CGCCTATACC
CCATCGCGCG GGGTGATTTC GGTGCGTGGC AACTGGCCGC TGACCCCGAC CATGGACGTG
GTGGTGCCTT ATGCACGCAC CATGGCCGAC CTACTGGAAA TTCTCGACGT GGTGGTCGCC
GATGACGTCG ACAAGCGCGG CGACCTGTGG CGCCTGCAAC CGTGGGTGCC GATTCCGGCG
GCCTCCAAGG TGCGCCCGGC GTCGTACCTG GACCTGGCGG TAGATGCCAG CGCGCTCAAG
GGCAAGCGCT TTGGCGTGCC ACGCATGTAC ATCAATGCCG ACACCGAGGC CGGTACCTCC
GAAAAACCGG GCATCGGCGG CCCGACTGGC CAACGCATCA ACACCCGCGC CACGGTCATC
GACCTGTGGC AGCAAGCGCG CCAGGCCCTG GAAGCGGCCG GTGCGCAAGT GCTGGAAGTG
GACTTCCCGC TGGTGTCCAA CTGCGAAGGC GACCGCCCGG GCGCACCGAC CGTTTACAAC
CGCGGTATCG TCAGCAAGGA GTTCCTCCAT GACGAACTGT GGGAGCTTTC GGGCTGGGGC
TTCGACGACT TCCTGCGTGC CAATGACGAC CCCAAGCTCA ACCGCCTGGC CGATGTCGAT
GGCCCACAGA TTTTCCCACA CGACCCAGGC ACCCTGCCCA ACCGCGAGGA CGACCTGGCG
GCGGGCATGG ACGAGTACGT CAACATGGCC AAGCGCGGCC TGAAGACCTG GGACCAGATC
GAGACCCTGC CAGATGGCCT GCGCGGCCTG GAGCAGACCC GCAAGCTGGA CCTGGAAGAC
TGGATGGACA AGCTGGGCCT GGATGCGGTG CTGTTCCCAA CCGTAGCGGA CGTTGGCCCG
GCTGACGCCG ACGTCAACCC GGCGTCGGCG GACATCGCCT GGAGCAACGG CATCTGGGTG
GCCAACGGTA ACCTGGCGAT CCGCCATCTG GGCGTACCGA CCGTGACCGT GCCAATGGGC
GTGATGGCCG ATATCGGCAT GCCGGTGGGG TTGACCTTTG CCGGCCGAGC CTACAGCGAC
AATGCGCTGC TGAGCTTTGG TGCGGCCTTC GAGGCGACCG GCTCGCGCCG CATGATCCCG
CCGCGCACTC CAACTCTGGG CTGA
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| Protein sequence | MIEVTEVSIA ALRDALESGR TTAVELVKAY LARIDAYDGA DTATALNAVV VRNPEALKEA
EASDARRAKG QVLSPLDGIP YTAKDSYLVK GLTAASGSPA FKNLVAQRDA FTIERLRAAG
AVCLGKTNMP PMANGGMQRG VYGRAESPYN ANYLTAPFAS GSSNGAGTAT AASFSAFGLA
EETWSSGRGP ASNNGLCAYT PSRGVISVRG NWPLTPTMDV VVPYARTMAD LLEILDVVVA
DDVDKRGDLW RLQPWVPIPA ASKVRPASYL DLAVDASALK GKRFGVPRMY INADTEAGTS
EKPGIGGPTG QRINTRATVI DLWQQARQAL EAAGAQVLEV DFPLVSNCEG DRPGAPTVYN
RGIVSKEFLH DELWELSGWG FDDFLRANDD PKLNRLADVD GPQIFPHDPG TLPNREDDLA
AGMDEYVNMA KRGLKTWDQI ETLPDGLRGL EQTRKLDLED WMDKLGLDAV LFPTVADVGP
ADADVNPASA DIAWSNGIWV ANGNLAIRHL GVPTVTVPMG VMADIGMPVG LTFAGRAYSD
NALLSFGAAF EATGSRRMIP PRTPTLG
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