Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2839 |
Symbol | |
ID | 5870625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3181780 |
End bp | 3182619 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641547957 |
Product | putative glutathione S-transferase YghU |
Protein accession | YP_001669069 |
Protein GI | 167033838 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.635211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.16455 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGC CCGCCTACGT GCCACCCAAG GTCTGGCGCA ACGACGCAGC GTCCGGCGGC CAGTTCGCCA GCATCAACCG CCCGGTTGCC GGCCCGACTC ACGACAAGGA GCTACCGCTA GGCAAGCACC CGCTGCAGCT GTATTCCCTT GCCACGCCCA ATGGGGTGAA GGTCACCATT GCCCTTGAAG AACTGCTCGC CTTGGGCCAC GCCAATGCCG AATACGATGC CTGGCTGATC CGCATCGGCG AAGGCGACCA GTTTTCCAGT GGCTTTGTCC AGGTCAACCC CAACTCGAAG ATCCCTGCCC TGCTCGACCG CAGCGTCGAA CCGCCTGTAC GGGTATTCGA ATCGGGTTCG ATCCTGCTGT ACCTGGCGGA CAAGTTCGGT GCACTGCTGC CAAAATCGCC AGCTGCACGT ACCGAGAGCC TGAACTGGCT GTTCTGGCAG ATGGGCGCTG CACCCTACCT GGGCGGTGGC TTTGGCCACT TCTACGTATA TGCCCCAGAA AAATTCGAGT ACGCCATCAA CCGCTTCACC ATGGAAGCCA AGCGTCAACT GGATGTACTC GACCGCCGTC TGGGCGAGAG CCGCTACCTG GGCGGCGAGG AGTACAGTAT CGCCGACATT GCCGTGTGGC CTTGGTATGG CCAGCTGGTG CGCGGCAACT TGTACGGCGC CGCTGAGTTC CTGGCGGTGG ACGAATACCC CAACGTACAG CGCTGGGCCG AGGAAATTGC CCTGCGCCCG GCGGTACAAC GCGGTACCCG TGTCAACCGT ACCTGGGGCG ATGAAGACAG CCAGGTGCCG GAGCGCCATT CAGCGGCAGA CCTGGATTAA
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Protein sequence | MSKPAYVPPK VWRNDAASGG QFASINRPVA GPTHDKELPL GKHPLQLYSL ATPNGVKVTI ALEELLALGH ANAEYDAWLI RIGEGDQFSS GFVQVNPNSK IPALLDRSVE PPVRVFESGS ILLYLADKFG ALLPKSPAAR TESLNWLFWQ MGAAPYLGGG FGHFYVYAPE KFEYAINRFT MEAKRQLDVL DRRLGESRYL GGEEYSIADI AVWPWYGQLV RGNLYGAAEF LAVDEYPNVQ RWAEEIALRP AVQRGTRVNR TWGDEDSQVP ERHSAADLD
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