| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2837 |
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| Symbol | |
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| ID | 5870623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3179379 |
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| End bp | 3180572 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641547955 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_001669067 |
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| Protein GI | 167033836 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.171853 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGC AACAACCCGC CCCCACCAGC AATACGCTGC ACATCACACT GCAGATCCTG
TCGATCGTTT TCTACACCTT CATTGCCTTC CTCTGCATCG GCTTGCCGAT TGCAGTACTG
CCCAGCTATG TGCACGACCA ACTCGGCTTT GGCGCAGTGA TCGCTGGGGT AACGATTGGC
CTGCAATACC TGGCCACGCT GCTTAGCCGC CCGTTTGCGG GGAAGGTGGC GGACACCTTG
GGTGGTAAAC GGGCCATCCG CTTCGGCCTG TTGGGGATTG CCGGTTGCGG TGTGCTGACG
TTGTTCTCGG CCTGGACCTT GAGCGCCCCA CTGCTGAGCC TGACCCTGTT ACTCGGCGGG
CGTTTGCTAC TGGGTGTCGC CCAAGGGTTG ATCGGGGTGG CCACCTTGAG CTGGGGCATC
AGCCAGGTCG GCCCCGAGCA CACGGCCAGG GTGATCTCAT GGAACGGTAT CGCCTCCTAT
GGCGCTATCG CCATCGGTGC ACCGCTGGGC GTACTGGCCG TGGACGGGCT GGACTTCAGC
GTACTGGGGC CGACCTTGCT GGTACTGGCA ACCCTTGCCC TGCTGGTGCT GCGCAAGCGC
CCCGACGTGG TAGTGGTACG CGGCGAGCGT CTGCCCTTCT GGTCAGCGTT CGGCCGGGTT
GCGCCGTGTG GCCTGGGCCT GACCTTGGCC TCGATCGGCT ACGGAACCCT GACTACCTTC
GTTACCCTCT ACTACCTCGA GCGCGGCTGG GCAGGCGCGG CCTGGTGCCT GAGTGCGTTC
GGTGTGTGCT TCATCATTTC GCGGCTGCTG TTCGTCAACG CGGTCAACCG CTTTGGTGGC
TACAACGTGG CAGTAGCCTG CATGGCCACC GAAGTGCTCG GCCTGTGCCT GCTGTGGCTG
GCGCCCTCGC CGCCCTGGGC GCTGGTTGGC GCCGGGCTGA CCGGTTTCGG GCTCTCGCTG
GTGTACCCGG CACTGGGCGT GGAGGCGATC AAGCAGGTGC CCAGCAGCAG CCGCGGCGCG
GGGTTGGGTG CCTATGCGGT GTTCTTCGAC ATGGCGCTGG CCATCGCCGG CCCCGTGATG
GGGGCCGTAG CCGTGCACTT GGGCTATGCC TCGATTTTCT GCGTGGCGGC CCTGCTCGCC
CTGGCCGGGG TCGGCCTAAC GTTGCTGCTG GCGCGGCGTG CCCGTCGCAG CTGA
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| Protein sequence | MTAQQPAPTS NTLHITLQIL SIVFYTFIAF LCIGLPIAVL PSYVHDQLGF GAVIAGVTIG
LQYLATLLSR PFAGKVADTL GGKRAIRFGL LGIAGCGVLT LFSAWTLSAP LLSLTLLLGG
RLLLGVAQGL IGVATLSWGI SQVGPEHTAR VISWNGIASY GAIAIGAPLG VLAVDGLDFS
VLGPTLLVLA TLALLVLRKR PDVVVVRGER LPFWSAFGRV APCGLGLTLA SIGYGTLTTF
VTLYYLERGW AGAAWCLSAF GVCFIISRLL FVNAVNRFGG YNVAVACMAT EVLGLCLLWL
APSPPWALVG AGLTGFGLSL VYPALGVEAI KQVPSSSRGA GLGAYAVFFD MALAIAGPVM
GAVAVHLGYA SIFCVAALLA LAGVGLTLLL ARRARRS
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