| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2817 |
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| Symbol | |
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| ID | 5870603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3165413 |
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| End bp | 3166693 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547935 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001669047 |
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| Protein GI | 167033816 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.850013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.439964 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACCT ATCTCGCCAG TGCCGAAGAC TCCGGCACCG ACACTGCCCA CAGCGTCCCC
CGGCGCTATG CCTGGGTGGT GTTTGCCCTG ACCTTCGGCC TGTTGATCTC CGACTATATG
TCGCGCCAGG TGCTCAATGC GGTGTTCCCG CTGCTAAAGG GCGAATGGGC GCTCAGCGAC
AGCCAACTCG GCTTGCTCAG CGGCATCGTC GCGCTGATGG TCGGCCTGCT GACCTTTCCG
CTGTCGTTGT TGGCCGACCG CTTCGGCCGG GTACGCAGCC TGGTGCTGAT GGCGGTGCTG
TGGAGCCTGG CCACGCTCGG CTGTGCCCTG GCGGAAAACT ACCCGCAAAT GTTCATTGCG
CGCTTTTTGG TCGGGGTTGG CGAGGCAGCC TATGGCAGTG TCGGCATTGC CGTGGTGGTC
GCAGTGTTCC CCCGCGACAT GCGCTCGACG CTGGCCGGGG CGTTCATGGC CGGCGGCATG
TTCGGTTCGG TGCTGGGCAT GGCCTTGGGC GGCGTGCTGG CCCAGCATTT GGGCTGGCGC
TGGGCATTTG CTGGCATGGC ATTGTTCGGC CTGGTGCTGG CGATGGTGTA TCCGATGATC
GTCAAGGAGG CGCGCATTGC ACCCAAGTGC GCGCAGCAGG CGCTCGACAA GGCCAGCCGC
CCGCTGCGCA CGCTGTACAG CAGCCGATCG GTCATCGCCG CCTATGTCGG CAGCGGCCTG
CAACTGTTCG TCGGTGGCAC CCTGATCGTG TGGATGCCCA GTTACCTCAA CCGCTATTAC
GCCATGGGTA CCGACCGTGC CGGGGCAATC GCCGCCGTCA TCGTGCTGTG CAGCGGTATC
GGCATGATCC TTTGCGCCAT GCTCTGCGAC CGCCTTGGGC GACAGCGCCC GGACCGCAAG
ATCAGCCTGG CCATCGCCTA CTGCCTGGGC AGTTGCATGC TGCTGAGCAT TGCCTTTGCG
CTGCCTGCCG GCACCGCGCA ACTGGTACTG ATTTGCCTGG GCATGATGAT CGCCGCCGGT
ACCAATGGCC CGTCCAGCGC CATGGTTGCC AACCTTACCC ATGCATCGGT GCATGGCACG
GCATTCGCCA CCCTGACCCT GGCCAACAAC CTGCTGGGCC TGGCCACCGG GCCACTGATC
ACGGGTCGGG TGTCCGACTT GATCGGGCTG CAGGCCGCGC TGCAATTGGT GCCGCTGATC
AGCATCGCGG CGGCGGCCGT GTTCTTTATC GCCAAGCGTC ACTACCACCG CGACATGGAC
CGTCTGCGCT CCAGGAGTTG A
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| Protein sequence | MATYLASAED SGTDTAHSVP RRYAWVVFAL TFGLLISDYM SRQVLNAVFP LLKGEWALSD
SQLGLLSGIV ALMVGLLTFP LSLLADRFGR VRSLVLMAVL WSLATLGCAL AENYPQMFIA
RFLVGVGEAA YGSVGIAVVV AVFPRDMRST LAGAFMAGGM FGSVLGMALG GVLAQHLGWR
WAFAGMALFG LVLAMVYPMI VKEARIAPKC AQQALDKASR PLRTLYSSRS VIAAYVGSGL
QLFVGGTLIV WMPSYLNRYY AMGTDRAGAI AAVIVLCSGI GMILCAMLCD RLGRQRPDRK
ISLAIAYCLG SCMLLSIAFA LPAGTAQLVL ICLGMMIAAG TNGPSSAMVA NLTHASVHGT
AFATLTLANN LLGLATGPLI TGRVSDLIGL QAALQLVPLI SIAAAAVFFI AKRHYHRDMD
RLRSRS
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