| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2816 |
|---|
| Symbol | |
|---|
| ID | 5870602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 3164755 |
|---|
| End bp | 3165408 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641547934 |
|---|
| Product | DSBA oxidoreductase |
|---|
| Protein accession | YP_001669046 |
|---|
| Protein GI | 167033815 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2761] Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.610355 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAACAGC TGTTGTCCAT CGAAGTGTTT TTCGATTTCG TCTGCCCTTG GTGCCTGATT
GGCCAGCGGC ACCTGCAAGC GGCCTTGTTG CTGCTGCAGC GTGAGCAGCC ACAGGTACAG
GTGCAGATAC ACTGGCGGGG CGTTCAGTTG CTGCCGGGGC TGCCTGCCAA CGGGGTGCCT
TTCAATACCT TCTACCTGCA ACGCCTGGGC AGCGAGCAGG CGGTACGCGA GCGCCAGGCT
CAGGTGCGTG CTGCTGCCAG TGTGGTGGGC GAGGACATCG ATTTTTCGCG CATCCGTCGC
ATGCCCAATA CCGGCAATGC CCACCGCTTG ATGCAACGGG CCGGCAGCCT GCTCAGCGCG
CCGCAGCAGG AAGCGTTGCT GGCGCAACTG TTCATTGCCT ATTTCCACCA GGGCCGCGAC
CTGGGTGATA GCCGCACATT GCTCGGCATC GCCCAGGGTT GCGGGCTTGA GCCCGGGCAG
GTGATCGACT GTTTGCGTGA CGATGGCAGC CCGTTCCTTG ACGGTGCAGG GCGAGCGGGC
AGCGCCGTAC CACGCTATCG CTTCAACCAG GGCCCGCTGC TTGCCGGGGT GCGGCCAGCC
GAGGCGCTGT TTGCCGCCAT GAATGACGCC TTGCAAGCGG TGGTGCAGGC ATGA
|
|---|
| Protein sequence | MKQLLSIEVF FDFVCPWCLI GQRHLQAALL LLQREQPQVQ VQIHWRGVQL LPGLPANGVP
FNTFYLQRLG SEQAVRERQA QVRAAASVVG EDIDFSRIRR MPNTGNAHRL MQRAGSLLSA
PQQEALLAQL FIAYFHQGRD LGDSRTLLGI AQGCGLEPGQ VIDCLRDDGS PFLDGAGRAG
SAVPRYRFNQ GPLLAGVRPA EALFAAMNDA LQAVVQA
|
|---|
| |