Gene PputGB1_2812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2812 
Symbol 
ID5870598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3160601 
End bp3162556 
Gene Length1956 bp 
Protein Length651 aa 
Translation table11 
GC content64% 
IMG OID641547930 
Producthypothetical protein 
Protein accessionYP_001669042 
Protein GI167033811 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.229228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGAAC ACCGCATTCA CCGTGCTGTG AAACCACAGC GCTGCCTGCT CGCCTGCGCC 
ATCGGCTTGC TCACGCTGCC CGCCGCCCAG GCGTTCGAAG TCGATACCGG CCATGAAGAC
TGGGCCGTGC GCTTCGACAA TACCGTCAAA TACAACTACG GCGTGCGTAC CGAGAGTGCC
GACAAGCGCC TGCTGGGCAC GCCCAACAGC AACGACGGCG ACTACAACTT CCGCAAGGCC
GGCACCAACA TCACCAACCG GGTCGACCTG CTGACCGAGC TGGATGTGGT GTACCAGGGC
AACAGCGGTT TTCGCGTCAG CACTGCCAGC TGGTACGACA AGGCCTATGA CAACACCGGC
TCCAACAGCA ACCCATTCGT CAACGGCAAC GGTGACCAGT CGGGTATCAA CCCCAGCCTC
AATGGCCTGC CTGGGACCGG CATCCCGCTA GGCAGCCCAC ACCTGAGCAA CTACGCCCAG
CGTTACTACA GCGGCCCGTC TGGCGAAGTG CTGGATGCCT TCGTGTTCAT GAGCCGTGAC
GTGGGCGAAG CGTCGCAGGT CAGCGCCAAG CTGGGCCAGC ACAACCTGTT CTGGGGTGAA
ACCTTGCTCA ACCCGGTGCA TTCGCTTAGT TATGGCCAAT CAGGCCTGGA CCTGGCCAAG
CTGGCGGCCT CGCCGGGCAC CGAGGCCAAG GAGCTTTTCG TACCCCGCAA CCAGCTGTCG
ACCGCGTTCC TGGTCAACTC CGAGCTCACC CTGGGTGCCC AGTACTTCTT CGACTGGGAT
GCCGCCCGGC TGCCTGAAGC CGGCACGTAC TATGGCGGCT CTGATGTGGT GGGTGAGGGC
GCGCAGAGCT TCCTGTTGGG CCACACCGGT ACGCCGGGGT TGATCCCGGT GCGCGGTGCG
CTCACCACCA TTCGCCGCGG TCATGACCTG ACCCCCGGCA AAAGCGGTGA CTGGGGCATC
ATGGCCAAGT GGTCGCCAGA GTGGCTGGGC GGCACCCTCG GCTTCTACTA CCGCAAGACG
TCCGAGATCC TGCCCCAGGC CTGGCTCGAT GCGCGCGGCA TGACCGTGGC CAACGGCCCA
TTCGGCAACC CACCGGGCAG CCGCCAAGGC GCGATCGGCA ACCTCTACAA CTCGCTACAA
AGCACCACTT ACCAGTTCGC CTACGCCGAC AACATCGACA TTTATGGGCT GAGCCTCTCC
AAGGATGTGG CGGGCATCAG CGTCGGCAGC GACCTGAACA TCCGCCACAA CATGCCGCTG
GCGAGCATTC CGGCAATCGT CAGCGCCCCC GGCCAAGGCG GCCTGGGCGG CGGCTTTGGC
CTGCTGCCGG CACGGCTGCC CAGCAGCGGG GTGATCTACG ACGTGCCCAA GGATGGCGAC
AGCCTGAGCG CCACCGGCGA CACCTTGCAC TTCACCCTCA ACGGCCTGAT GACGATTGGC
GACACACCGC TGTTCGACTC GGCAACCCTG CTGGGCGAGC TGTTCTACAG CAACCTGCTC
AAGCTCGATA GCCACAACGA AGCTTTGTAC AAAGGCAAGA GCAGCTACCG CGGCATCGAC
AAGGCCACCC GCGACAACTG GGGCATCGCC GTCAATTTCA CCCCTACCTG GTACCAGGTG
TTTCCGGGCA TGGACCTGAG CATGCCGCTT TCGGTCAACG TCGGCATCGA CGGTGTATCG
CCGGTGCAGG GTGGCGGTGC CGAGAACACT GGCAACTACG CGGTGGGTTT CAGCGCTGCG
ATCTACAACC AGTACTTCGT CGACCTCAAG TACGTCGACA GCTTCGGTGA GACCAAGGCC
TGCAAGGACG GCCAGACCGA CGGCAGCACC CCCAATGCCC TGGACGGCGA ACAGGATTAC
ACCTGCTACG GCGGCGGCTA CGCCTCCTTC TCGGGGGGTG GTGCCACCAC TGAAGACCGT
GGCGCCCTGT ACCTGACCGT CAAGACGACC TTCTGA
 
Protein sequence
MPEHRIHRAV KPQRCLLACA IGLLTLPAAQ AFEVDTGHED WAVRFDNTVK YNYGVRTESA 
DKRLLGTPNS NDGDYNFRKA GTNITNRVDL LTELDVVYQG NSGFRVSTAS WYDKAYDNTG
SNSNPFVNGN GDQSGINPSL NGLPGTGIPL GSPHLSNYAQ RYYSGPSGEV LDAFVFMSRD
VGEASQVSAK LGQHNLFWGE TLLNPVHSLS YGQSGLDLAK LAASPGTEAK ELFVPRNQLS
TAFLVNSELT LGAQYFFDWD AARLPEAGTY YGGSDVVGEG AQSFLLGHTG TPGLIPVRGA
LTTIRRGHDL TPGKSGDWGI MAKWSPEWLG GTLGFYYRKT SEILPQAWLD ARGMTVANGP
FGNPPGSRQG AIGNLYNSLQ STTYQFAYAD NIDIYGLSLS KDVAGISVGS DLNIRHNMPL
ASIPAIVSAP GQGGLGGGFG LLPARLPSSG VIYDVPKDGD SLSATGDTLH FTLNGLMTIG
DTPLFDSATL LGELFYSNLL KLDSHNEALY KGKSSYRGID KATRDNWGIA VNFTPTWYQV
FPGMDLSMPL SVNVGIDGVS PVQGGGAENT GNYAVGFSAA IYNQYFVDLK YVDSFGETKA
CKDGQTDGST PNALDGEQDY TCYGGGYASF SGGGATTEDR GALYLTVKTT F