Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2812 |
Symbol | |
ID | 5870598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3160601 |
End bp | 3162556 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641547930 |
Product | hypothetical protein |
Protein accession | YP_001669042 |
Protein GI | 167033811 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.229228 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGAAC ACCGCATTCA CCGTGCTGTG AAACCACAGC GCTGCCTGCT CGCCTGCGCC ATCGGCTTGC TCACGCTGCC CGCCGCCCAG GCGTTCGAAG TCGATACCGG CCATGAAGAC TGGGCCGTGC GCTTCGACAA TACCGTCAAA TACAACTACG GCGTGCGTAC CGAGAGTGCC GACAAGCGCC TGCTGGGCAC GCCCAACAGC AACGACGGCG ACTACAACTT CCGCAAGGCC GGCACCAACA TCACCAACCG GGTCGACCTG CTGACCGAGC TGGATGTGGT GTACCAGGGC AACAGCGGTT TTCGCGTCAG CACTGCCAGC TGGTACGACA AGGCCTATGA CAACACCGGC TCCAACAGCA ACCCATTCGT CAACGGCAAC GGTGACCAGT CGGGTATCAA CCCCAGCCTC AATGGCCTGC CTGGGACCGG CATCCCGCTA GGCAGCCCAC ACCTGAGCAA CTACGCCCAG CGTTACTACA GCGGCCCGTC TGGCGAAGTG CTGGATGCCT TCGTGTTCAT GAGCCGTGAC GTGGGCGAAG CGTCGCAGGT CAGCGCCAAG CTGGGCCAGC ACAACCTGTT CTGGGGTGAA ACCTTGCTCA ACCCGGTGCA TTCGCTTAGT TATGGCCAAT CAGGCCTGGA CCTGGCCAAG CTGGCGGCCT CGCCGGGCAC CGAGGCCAAG GAGCTTTTCG TACCCCGCAA CCAGCTGTCG ACCGCGTTCC TGGTCAACTC CGAGCTCACC CTGGGTGCCC AGTACTTCTT CGACTGGGAT GCCGCCCGGC TGCCTGAAGC CGGCACGTAC TATGGCGGCT CTGATGTGGT GGGTGAGGGC GCGCAGAGCT TCCTGTTGGG CCACACCGGT ACGCCGGGGT TGATCCCGGT GCGCGGTGCG CTCACCACCA TTCGCCGCGG TCATGACCTG ACCCCCGGCA AAAGCGGTGA CTGGGGCATC ATGGCCAAGT GGTCGCCAGA GTGGCTGGGC GGCACCCTCG GCTTCTACTA CCGCAAGACG TCCGAGATCC TGCCCCAGGC CTGGCTCGAT GCGCGCGGCA TGACCGTGGC CAACGGCCCA TTCGGCAACC CACCGGGCAG CCGCCAAGGC GCGATCGGCA ACCTCTACAA CTCGCTACAA AGCACCACTT ACCAGTTCGC CTACGCCGAC AACATCGACA TTTATGGGCT GAGCCTCTCC AAGGATGTGG CGGGCATCAG CGTCGGCAGC GACCTGAACA TCCGCCACAA CATGCCGCTG GCGAGCATTC CGGCAATCGT CAGCGCCCCC GGCCAAGGCG GCCTGGGCGG CGGCTTTGGC CTGCTGCCGG CACGGCTGCC CAGCAGCGGG GTGATCTACG ACGTGCCCAA GGATGGCGAC AGCCTGAGCG CCACCGGCGA CACCTTGCAC TTCACCCTCA ACGGCCTGAT GACGATTGGC GACACACCGC TGTTCGACTC GGCAACCCTG CTGGGCGAGC TGTTCTACAG CAACCTGCTC AAGCTCGATA GCCACAACGA AGCTTTGTAC AAAGGCAAGA GCAGCTACCG CGGCATCGAC AAGGCCACCC GCGACAACTG GGGCATCGCC GTCAATTTCA CCCCTACCTG GTACCAGGTG TTTCCGGGCA TGGACCTGAG CATGCCGCTT TCGGTCAACG TCGGCATCGA CGGTGTATCG CCGGTGCAGG GTGGCGGTGC CGAGAACACT GGCAACTACG CGGTGGGTTT CAGCGCTGCG ATCTACAACC AGTACTTCGT CGACCTCAAG TACGTCGACA GCTTCGGTGA GACCAAGGCC TGCAAGGACG GCCAGACCGA CGGCAGCACC CCCAATGCCC TGGACGGCGA ACAGGATTAC ACCTGCTACG GCGGCGGCTA CGCCTCCTTC TCGGGGGGTG GTGCCACCAC TGAAGACCGT GGCGCCCTGT ACCTGACCGT CAAGACGACC TTCTGA
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Protein sequence | MPEHRIHRAV KPQRCLLACA IGLLTLPAAQ AFEVDTGHED WAVRFDNTVK YNYGVRTESA DKRLLGTPNS NDGDYNFRKA GTNITNRVDL LTELDVVYQG NSGFRVSTAS WYDKAYDNTG SNSNPFVNGN GDQSGINPSL NGLPGTGIPL GSPHLSNYAQ RYYSGPSGEV LDAFVFMSRD VGEASQVSAK LGQHNLFWGE TLLNPVHSLS YGQSGLDLAK LAASPGTEAK ELFVPRNQLS TAFLVNSELT LGAQYFFDWD AARLPEAGTY YGGSDVVGEG AQSFLLGHTG TPGLIPVRGA LTTIRRGHDL TPGKSGDWGI MAKWSPEWLG GTLGFYYRKT SEILPQAWLD ARGMTVANGP FGNPPGSRQG AIGNLYNSLQ STTYQFAYAD NIDIYGLSLS KDVAGISVGS DLNIRHNMPL ASIPAIVSAP GQGGLGGGFG LLPARLPSSG VIYDVPKDGD SLSATGDTLH FTLNGLMTIG DTPLFDSATL LGELFYSNLL KLDSHNEALY KGKSSYRGID KATRDNWGIA VNFTPTWYQV FPGMDLSMPL SVNVGIDGVS PVQGGGAENT GNYAVGFSAA IYNQYFVDLK YVDSFGETKA CKDGQTDGST PNALDGEQDY TCYGGGYASF SGGGATTEDR GALYLTVKTT F
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