| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2807 |
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| Symbol | |
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| ID | 5870593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3152283 |
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| End bp | 3153923 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641547925 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_001669037 |
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| Protein GI | 167033806 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.988252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACTA CCCGCGTCAT GCCCCCGGCC GAGCAGGCCT ATGCGTACCC GCTGCTGATC
AAGCGCCTGC TGTTGTCGGG TGTGCGCTAC CAGCCCAACC AGGAAATCGT CTACGCCGAC
AAGCTGCGCT ACACCTACAC CACGTTGCTG GAGCGTATTC AACGGCTGGC CAACGTGCTG
AGCGCTGCCG GGGTCCAGCC TGGCGACACC GTGGCCTTGC TCGACTGGGA CAGCCACCGC
GCATTGGAGT GTTTCTTCGC CGTACCCATG CTGGGCGCAG TGTTGCATAC GGTAAACGTG
CGGTTGTCCA GCGAGCAGGT GCGCTACACC ATGAACCACG CCGAGGACCG GCTGGTGCTG
GTGCACGACG ACTTCCTGCC GTTGATGCAG CAGCTGCGCG CCGACCTGCC GACAGTGGAG
GGCTTCATCC GCCTGAGTGA CGGCGGTCAC GCCGCGCAAG GCGTGCCTCT GCTGGGCGAG
TACGAAACCA TGCTGGCGGC TGCAGAACCG TACTTCGAAT TCCCGGACTT CGACGAAAAC
TCGCTGGCCA CGCTGTTCTA TACCAGCGGT ACCACCGGCA ACCCCAAGGG TGTGTACTTC
AGTCACCGGC AACTGGTGCT GCATACCCTG GTCGAGCAGG GCACTTTGGC CGCGTGCGGT
GAGGTACCGC TGCTGCGCAC CGGCGATGTG TACATGCCGA TCACGCCCAT GTTCCATGTG
CATGCCTGGG GCGTGCCTTA CGTGGCGACG GCACTTGGCA TCAAGCAGGT CTACCCGGGG
CGCTACGAGC CCAACCGCCT GGTGCGCCTG TTCCATGAGG AGGGGGTGAC CTTCTCCCAT
TGCGTGCCAA CGGTGCTGCA GATGATGCTC GACAGCGAGC AAGGGCGCCG CACCGACCTT
GCCGGCTGGA AAATGCTGCT GGGCGGCAGC GCGCTGACCC TGGGCCTGGC CCAGCGCGCC
AGCGAGCGCG GCATCAGCGT GCACTGTGGT TACGGCATGT CGGAAAGCTG CCCGCTGCTC
AGCATCACCT ACCTGAGTGC CGAGCTGCTG GCAAAGCCCA TGGCGCAACA ATTGCCGCTG
CGCATCGATG CCGGTGTGCC GATTGCCATG GTGGACCTGC GTATCGTCGA CAGCGAGGGC
CGGGAGGTGC CGCACGACGG TGAAAGCCTG GGTGAAGTCG TGGTGCGCGC GCCTTGGCTG
ACCCAAGGCT ACCTGCACGA ACCGGAGCAA GGCGCAGCAC TGTGGTTGGG GGGCTGGATG
CACACCGGTG ACCTGGCTTG TATCGATGCG GCGGGCGTGG TGCGTATCCG CGACCGGATC
AAGGACGTGA TCAAGACCGG TGGCGAGTGG GTCAGCTCGG TAGCGCTGGA AAACCTGATC
AGCCAGCACC CGTTTGTCGC CTCGGTGGCT GTCGTCGGTG TTCCTGATCC ACAGTGGGGG
GAACAACCCT TGGCCTTGGT GGTCTGCTGT GAGGGTGTGC AACTGGACCA GCCGTCATTG
GCCAGGCACC TGCAGCCGTT TGTCGACAGC GGGCACTTGA ACAAGTGGGC GATACCACGG
CAGTTGCGTT GTGTGGACGA AATCCCCCGG ACCAGTGTCG GCAAGATCGA CAAGAAACGC
ATCCGCCAGA CGGAAGTCTA G
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| Protein sequence | MITTRVMPPA EQAYAYPLLI KRLLLSGVRY QPNQEIVYAD KLRYTYTTLL ERIQRLANVL
SAAGVQPGDT VALLDWDSHR ALECFFAVPM LGAVLHTVNV RLSSEQVRYT MNHAEDRLVL
VHDDFLPLMQ QLRADLPTVE GFIRLSDGGH AAQGVPLLGE YETMLAAAEP YFEFPDFDEN
SLATLFYTSG TTGNPKGVYF SHRQLVLHTL VEQGTLAACG EVPLLRTGDV YMPITPMFHV
HAWGVPYVAT ALGIKQVYPG RYEPNRLVRL FHEEGVTFSH CVPTVLQMML DSEQGRRTDL
AGWKMLLGGS ALTLGLAQRA SERGISVHCG YGMSESCPLL SITYLSAELL AKPMAQQLPL
RIDAGVPIAM VDLRIVDSEG REVPHDGESL GEVVVRAPWL TQGYLHEPEQ GAALWLGGWM
HTGDLACIDA AGVVRIRDRI KDVIKTGGEW VSSVALENLI SQHPFVASVA VVGVPDPQWG
EQPLALVVCC EGVQLDQPSL ARHLQPFVDS GHLNKWAIPR QLRCVDEIPR TSVGKIDKKR
IRQTEV
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