| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2806 |
|---|
| Symbol | |
|---|
| ID | 5870592 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 3151319 |
|---|
| End bp | 3152128 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641547924 |
|---|
| Product | lipopolysaccharide core biosynthesis domain-containing protein |
|---|
| Protein accession | YP_001669036 |
|---|
| Protein GI | 167033805 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.74995 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATTGA TGAACACACT TCCGTCGCAG CCAAGCGCTG AACGCGGGGC GTTCTCCCAT
TTCGAGGCGT GTCGCAACAC CCAGCAGGGC CCCGTGGTGA TACTTGCCTC CGGTGCGTCT
GCCAAGCATT TTCCATTGGG CGAATTCGCC CATTTGCCCA TCATCGCCAT GAACGGCTCG
GTTGCCATGA CCGCCGAACA CGGTATCAAA CCGTTCTTTT ACGTGTGCAC CGACAAAAGT
TTTCGCCTGC AACAGCCGGC CTTGTTCGCC ACGGCCTTGC GCGACAGCGA GCGCCTGGCA
CTTTGGCCCG AGCAGTATGC GGGTGCCAAT GTGCCAGCGG ATACCGAGTG TTATGCCTTG
CACAAAGCCG ACACGCCAGG CCTGCTGGAC GGTTTGCGTG GCCACGGTGA CAGCTGCGTG
TGCAACCGCG CACTGTGGAG CAAACGTAGC CGTTCGATTG CCTTCAGCAA AGACCTGGCC
CATGGTTTCT TCGATGCTCG CACAGTGGCG TACGTGGCCT TGCAGCTGGC TTACCACCTG
GGCTTCGAAG AGGTGCTGCT GGTAGGGGTA GACCTCGATC AGAGCGTCGG GCGCTTCTAC
GAGAACGGCA ACGGCGAGTG TTCGCCGTGC GGGCTGGACC AGCATTGGGA CAGCCGCATT
CTGCCGTCGT TGACACTGAT GGCCAGAGAA GTGGTCAACG AACATTTTCA TGTCTACAAC
CTGTCGGCGA CGTCGCGTAT TCCTGACGAT CTGATCCCCA AGGTCAACCT CAGCCAGGCG
CGGTACATTG CCGGCTGCGC AATGACTTGA
|
|---|
| Protein sequence | MPLMNTLPSQ PSAERGAFSH FEACRNTQQG PVVILASGAS AKHFPLGEFA HLPIIAMNGS
VAMTAEHGIK PFFYVCTDKS FRLQQPALFA TALRDSERLA LWPEQYAGAN VPADTECYAL
HKADTPGLLD GLRGHGDSCV CNRALWSKRS RSIAFSKDLA HGFFDARTVA YVALQLAYHL
GFEEVLLVGV DLDQSVGRFY ENGNGECSPC GLDQHWDSRI LPSLTLMARE VVNEHFHVYN
LSATSRIPDD LIPKVNLSQA RYIAGCAMT
|
|---|
| |