| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2795 |
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| Symbol | |
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| ID | 5870581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3141287 |
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| End bp | 3143245 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641547913 |
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| Product | acetoacetyl-CoA synthetase |
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| Protein accession | YP_001669025 |
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| Protein GI | 167033794 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR01217] acetoacetyl-CoA synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0816359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.10488 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGATG TGCTCTGGCG CCCCTCTACG GCGCAAATCG AGGCCAGCCG GATGGATGCC
TTCCGCCGCC GGGTCAACCT GCGCTACAAC CTGCAACTGA ACGACTACCA TGCGCTGCAC
AGCTGGAGCA TCGAGCAGCG GCCCGCCTTC TGGCAAACCC TTGCCGAGTA TTTCCACGTT
CATTGGCATA CTCCGCCGAG CCAAGTGCTA AGCGAAGGGC CGCAGATGCC CGATGCACAG
TGGTTCGCCA ATGCCACCCT GAACTTCGCC GAACACCTGC TGCGCCGCCG TGACGACCGC
CCGGCCGTGG TCGCCGTGCG CGAAGACGGC CAACGTGAAG TGTTCACCCA TGCTGAACTG
GCCGCACAGG TCGCCGGGCT GCAAACGGCG CTCAAGGCCA TTGGTATCGC CCCCGGCGAC
CGGGTGGCCG CCGTCATGCC CAACACCTGG CAAACACTGG TCGCCATGCT CGCCTGCAGC
AGCATTGGCG CGGTCTGGTC CACCTCTTCG CCCGAGTTTG GCGTGCACGG CATCATCGAC
CGTTTCGGCC AGATCGAACC CAAGCTGCTG ATTGTCTGCG CCGGTTACCA ATACGCCGGC
AAGGCCATCG ACCAAGTGGC CAAGGTCAAC CAGGTGTGCG CTCAGTTGCC CGGCCTGGAG
CAGCTGATCG TGGTGCCCCA TACCCGCAGC GGTACACGCG CCGACGAGTT CCAGGCAACC
AACGTCAGCC TGTGGGATGA TTTCTTCCAG CCCGGCGGCG AGCCCCGCTT CACCCCGCTG
CCTTTCGATC ACCCGCTGTA CATTCTCTAC TCCAGTGGTA CCACCGGCGT GCCCAAGTGC
ATTGTCCATC GTGCCGGTGG CGTGCTGTTG CAGCACCTCA AGGAACACGG CCTGCACAAT
GACCTGAAGG CCGATGACGT GCTGTTCTAC TACACCACCT GCGGTTGGAT GATGTGGAAC
TGGCTGGCCA GCGGCCTGGC GGTGGGGGCC ACGCTGGTGC TGTACGACGG CTCACCGTTC
CACCCTGGCC CCGAGCGCCT GCTGGACCTG ATCGAAGCCG AAGGCATCCA CGCCTTTGGC
ACCAGTGCCA AGTACCTGGC AGCACTGGAG CAGGCGGGCC TTGAACCTGC CGCCAGCCAC
CGCCTGGGCA GCCTGCGGCT GCTGCTGTCC ACCGGTTCGC CGTTGTCACC TCACAGCTAT
GACTACGTGT ACGGCAAGAT CAAGGCCGAT CTGTGGCTGG TGTCCATGTC GGGTGGGACC
GACATCGTTT CCTGCTTCGT GCTGGGCAAC CCGACTTTGC CGGTGCGCCG TGGCGAAATT
CAGTGCAAGG GCCTGGGGAT GGCGGTGCAA GTGTGGAACG AGCAAGGCCA TGCCGTGGTG
GACGAAAAAG GCGAACTGGT GTGCGCGCAC CACTTTCCCT CCATGCCGCT GGGGTTCTGG
AATGACCCGG ACGGTAGCCG TTACCACGAC ACCTACTTCA GCCAGTTTCC GGGGGTGTGG
GCCCAGGGCG ACTATGCCGA GCAACGTGCC AGCGGGGGCA TGGTGATCCA CGGTCGCTCC
GACGCCGTGC TCAACCCTGG CGGCGTGCGC ATTGGCACGG CGGAAATCTA CCGCCAGGTG
GAGAAAGTCG AGCAGGTAAT GGAAAGCGTG GCCATCGGCC AGGACTGGCA CGGGGATGTG
CGGGTGGTGC TGTTCGTGCG CCTGCACCAA GGCCTGCAAC TGGATGACGC CCTGCGCCAG
CGCATTCGCC AGGTGATACG TCAGTACACC ACACCCCGCC ACGTACCTGC GGTGATCGCC
CAGGTCAGCG ATATACCGCG CACCATCAGC GGCAAGCTGG TGGAGCTGGC GATTCGCAAC
GTGGTGCACG GGTTGCCGGT GAAGAACACC GATGCGCTGG CCAACCCAGA GGCGCTGGAG
CAGTTTCGTG ATCGCGTGGA GTTGCGCGAG CAGGCATAA
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| Protein sequence | MNDVLWRPST AQIEASRMDA FRRRVNLRYN LQLNDYHALH SWSIEQRPAF WQTLAEYFHV
HWHTPPSQVL SEGPQMPDAQ WFANATLNFA EHLLRRRDDR PAVVAVREDG QREVFTHAEL
AAQVAGLQTA LKAIGIAPGD RVAAVMPNTW QTLVAMLACS SIGAVWSTSS PEFGVHGIID
RFGQIEPKLL IVCAGYQYAG KAIDQVAKVN QVCAQLPGLE QLIVVPHTRS GTRADEFQAT
NVSLWDDFFQ PGGEPRFTPL PFDHPLYILY SSGTTGVPKC IVHRAGGVLL QHLKEHGLHN
DLKADDVLFY YTTCGWMMWN WLASGLAVGA TLVLYDGSPF HPGPERLLDL IEAEGIHAFG
TSAKYLAALE QAGLEPAASH RLGSLRLLLS TGSPLSPHSY DYVYGKIKAD LWLVSMSGGT
DIVSCFVLGN PTLPVRRGEI QCKGLGMAVQ VWNEQGHAVV DEKGELVCAH HFPSMPLGFW
NDPDGSRYHD TYFSQFPGVW AQGDYAEQRA SGGMVIHGRS DAVLNPGGVR IGTAEIYRQV
EKVEQVMESV AIGQDWHGDV RVVLFVRLHQ GLQLDDALRQ RIRQVIRQYT TPRHVPAVIA
QVSDIPRTIS GKLVELAIRN VVHGLPVKNT DALANPEALE QFRDRVELRE QA
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