| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2792 |
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| Symbol | |
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| ID | 5870578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3138512 |
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| End bp | 3139903 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641547910 |
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| Product | citrate transporter |
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| Protein accession | YP_001669022 |
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| Protein GI | 167033791 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG2610] H+/gluconate symporter and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.221695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.129925 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTGC TCATCGCTCT CGCCGCTCTG GCCCTGCTGA TGCTGGCTGC CTACCGCGGT
TACAGCGTAA TTCTGTTCGC CCCCATCGCC GCCCTCAGCG CCGTCCTGCT TACCGACCCA
TCCGCCGTGG CCCCCGCATT CACCGGGGTG TTCATGGAGA AAATGGTCGG TTTCATCAAA
CTGTATTTCC CGGTATTCCT GCTGGGCGCG GTGTTCGGCA AGCTGATCGA GCTGTCCGGT
TTCTCTCGCT CGATCGTCGC GGCGGCCATC CGCCTGCTCG GCACGCGCCA GGCGATGCTG
GTGATCGTGC TGGTTTGCGC CCTGCTCACC TACGGCGGTG TGTCGCTGTT CGTGGTGGTG
TTCGCGGTGT ACCCGTTCGC CGCCGAAATG TTCCGCCAAA GCAACATCCC CAAACGCCTG
ATCCCGGCCA CCATCGCCCT GGGCGCCTTC TCGTTCACCA TGGACGCCCT GCCCGGCACC
CCACAGATCC AGAACATCAT CCCCAGCACC TTCTTCAACA CCACCGCCTG GGCTGCGCCG
TGGCTGGGCC TGATCGGCAC GTTGTTCGTG TTCTTTACCG GCATGGCCTA CCTGCAGCGC
CAACGCAACA AGGCCCAGCG CGCCGGTGAA GGTTATGGCA CCGACTTGCG CAACGAGCCA
GAAACCGCTG CCGACCTGAC CCTGCCCAAC CCTTGGCTGG CACTCTCGCC GCTGATACTG
GTGGGGGTGA TGAACCTGCT GTTCACCCAC TGGATCCCCC AGTGGTACGG CCCCAGCCAC
AGCCTGCAAC TGCCAGGCAT GAGCGCGCCG GTACAAAGCG ACGTGGCCAA GCTCACCGCC
ATCTGGGCCG TGCAGGCGGC GTTGCTGGTG GGTATCCTGA TGGTGCTGGT GTGCGCCTTC
GGCGCCATTC GCACACGCCT GGCCGAAGGC ACCAAAAGCG CGGTGAGCGG CGCGCTGCTG
GCGGCGATGA ACACCGCGTC GGAATACGGC TTTGGCGCAG TGATCGCCTC GCTGCCGGGC
TTTCTGGTAC TGGCCGATGC CCTGCGCGGC ATCCCCAACC CACTCGTCAA TGAAGCCATC
ACCGTGACCT TGCTGGCCGG CATCACCGGC TCTGCTTCGG GCGGCATGAG CATCGCCCTG
GCGGCCATGG GCGATACCTT CATCGCCGCC GCCCATGCCG CCAACATCCC GCTCGAAGTG
CTGCACCGGG TAGCCGCCAT GGCCAGTGGC GGTATGGACA CACTGCCACA CAACGGCGCG
GTGATCACCT TGCTGGCCGT TACCGGCCTG ACTCACCGCG AGGCGTACAA GGACATTTTC
GGTATTACTC TGATCAAGAC CCTGGCGGTG TTCGTGGTCA TCGCCACGTT CTATGCCACC
GGCATCGTTT AA
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| Protein sequence | MTVLIALAAL ALLMLAAYRG YSVILFAPIA ALSAVLLTDP SAVAPAFTGV FMEKMVGFIK
LYFPVFLLGA VFGKLIELSG FSRSIVAAAI RLLGTRQAML VIVLVCALLT YGGVSLFVVV
FAVYPFAAEM FRQSNIPKRL IPATIALGAF SFTMDALPGT PQIQNIIPST FFNTTAWAAP
WLGLIGTLFV FFTGMAYLQR QRNKAQRAGE GYGTDLRNEP ETAADLTLPN PWLALSPLIL
VGVMNLLFTH WIPQWYGPSH SLQLPGMSAP VQSDVAKLTA IWAVQAALLV GILMVLVCAF
GAIRTRLAEG TKSAVSGALL AAMNTASEYG FGAVIASLPG FLVLADALRG IPNPLVNEAI
TVTLLAGITG SASGGMSIAL AAMGDTFIAA AHAANIPLEV LHRVAAMASG GMDTLPHNGA
VITLLAVTGL THREAYKDIF GITLIKTLAV FVVIATFYAT GIV
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