| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2791 |
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| Symbol | |
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| ID | 5870577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3136854 |
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| End bp | 3138242 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547909 |
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| Product | putative sigma54 specific transcriptional regulator |
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| Protein accession | YP_001669021 |
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| Protein GI | 167033790 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.389453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0964858 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGACA GCGACAGCCT CAAGGACTAC CCACAAGTAC GGCAACTGGC GATCCGCTCG
CTGTTCGAGA TCATCGAGCA GTCCAGTGAA GGCACGGTGA TCGTCGACCG CCAGGCACGC
ATCGTCTGGA TGAACGAGCG CTACGCCCGA CGCTTTGGCC TGGCCGACGC GGCCAGTGCC
ATCGGCCAGC CGTGTGAAAC AGTGATCCCC GGCAGCCTGA TGCGCGAGGT GGTGAGTAAT
GGCCGGCCGA TTCTGCTGGA CATGCTCGAC ACCCCGAATG AGCCGCTGGT GGTAATGCGC
CTGCCCATCC ACGATGACCA AGGCACGCTG ATCGGCGCTA TCGGCTTTGC CCTGTTCGAC
GAACTGCGCA GCCTGTCACC GCTGCTCAAG CGCTACTCCA GCATGCAGCA GGAACTGGCC
TCGACCCGCT CGCAACTGCG CGCCCGCCAG GCCAAGTACA GCTTCGCCCA GTTCGTTGGC
AGCAGCGCTG CCTGCCTGGA AGCCAAGCGC CGCGCCCGGC GTGGCGCGGC CAGCGATTCG
CCGGTGTTGC TGCTGGGCGA AACCGGCACC GGCAAAGAGC TACTGGCCCA CGCCATCCAT
GCCGCATCAG CGCGGGCACA CAAAGCCTTT GTCAGTATCA ACAGCGCGGC AATCCCCGAA
ACGCTGCTGG AAGCCGAATT CTTCGGCACT GCGCCAGGTG CATTTACCGG TGCCGACCGC
AAAGGCCGCA GTGGCAAGTT GCAGCTGGCC GAGGGCGGCA CGTTGTTCCT CGACGAGATC
GGCGACATGC CGCTGGCCCT GCAGAGCAAG CTGCTGCGGG TGCTGCAGGA GAAGGAATAC
GAACCGGTAG GCTCGAACCA GATGCTGCGC AGCGACGTGC GCATCATCGC CGCCACCTCC
ATCGACTTGC AGGCCGCCAT GGCCCGTGGG GCGTTCCGGG CCGACCTGTA TTACCGACTG
AATGTGCTGC CGATCGATGT GCCGCCGCTG CGGTTGCGGC TGGAGGACCT GCCGGCGCTG
TGCGAGGCCA TACTGGGTGA ACTGGGTAGC CGGTACGAAC TGGAGGCAGA CGCGCAGCAC
CTGCTGGCGA TGCATGCGTG GCCGGGGAAC ATTCGCGAAC TGCGCAATGT ACTGGAGCGC
GCAACATTGC TGGCGGACCA GCCCCGGTTG GAAGCGGCGG ATTTGCGGGC GGCGCTGGGG
CCTTTGAGCC CGCTGGCGGA TGCGCCTGCG CCTGTGCGGC AGACCTACCG CGAGGCGTGC
GAAGCGTTTG AACGCCAGCT GATTGGCCAG GCATTGGCAG AGCATGGGGG CGTTGTGCCG
CAAGCTGCGG CAGCGCTAGG GCTGGGTCGG TCAACGCTGT ACAAGAAAAT GGTGGCACTC
GGTCTCTGA
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| Protein sequence | MHDSDSLKDY PQVRQLAIRS LFEIIEQSSE GTVIVDRQAR IVWMNERYAR RFGLADAASA
IGQPCETVIP GSLMREVVSN GRPILLDMLD TPNEPLVVMR LPIHDDQGTL IGAIGFALFD
ELRSLSPLLK RYSSMQQELA STRSQLRARQ AKYSFAQFVG SSAACLEAKR RARRGAASDS
PVLLLGETGT GKELLAHAIH AASARAHKAF VSINSAAIPE TLLEAEFFGT APGAFTGADR
KGRSGKLQLA EGGTLFLDEI GDMPLALQSK LLRVLQEKEY EPVGSNQMLR SDVRIIAATS
IDLQAAMARG AFRADLYYRL NVLPIDVPPL RLRLEDLPAL CEAILGELGS RYELEADAQH
LLAMHAWPGN IRELRNVLER ATLLADQPRL EAADLRAALG PLSPLADAPA PVRQTYREAC
EAFERQLIGQ ALAEHGGVVP QAAAALGLGR STLYKKMVAL GL
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