| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2789 |
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| Symbol | |
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| ID | 5870575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3134760 |
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| End bp | 3135818 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641547907 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001669019 |
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| Protein GI | 167033788 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0469446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.12532 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCT ACCTGCTGCG CCGCCTGTTG CTGATCATTC CGACGCTGCT GGCAATCCTG
CTGGTCAATT TCGCCATCGT CCAAGCCGCG CCGGGTGGCC CGGTGGAGCA GGCCGTGGCG
CGCCTGCAGG GCCTCGGTGG CAGCGCACCC GGCGCGCGGG CTGAGGTTGT GCATGGTGAA
TCCCGCGCCA CCCGTGGCCT GGACCCGAAA CTGATCGATG AGATAAAGCG CCAGTACGGT
TTCGACAAGT CCGCCCCCGA ACGCCTGTGG CTGATGCTGG GTCAGTATGC CCGGCTGGAT
TTTGGCAACA GCTTCTTTCG CGGAGCGAAG GTGACCGACC TGATCCTCGA CAAGTTGCCG
GTTACCTTGT CGCTGGGTTT CTGGGCCACG CTGATCACTT ACCTGGTGTC GATCCCGCTG
GGTATTCGCA AGGCAGTGCG CCACGGCAGC CGTTTCGATG CCTGGAGCAG CGCGCTGATC
GTGATTGGCT ACGCCCTGCC CTCGTTCCTC TTCGCCCTGT TGCTGATCGT GCTGTTCGCC
GGCGGCACCT CGCTCAACTG GTTCCCGGTG CGTGGCCTGG TCTCGGACAA TTTCGACGAG
CTCAGCCTGC TGGGCAAGGT CGCGGACTAT TTCTGGCACC TGGTGTTGCC GGTCGGCGCC
CTGGTGATCG GTGGTTTCGC CACCCTCACG CTGCTGACCA AGAACGCCTT CCTCGACGAG
ATTTCCCGCC AGTATGTGGT GACTGCCAGG GCCAAGGGCC TCAGCGAGCG CTGTGTGCTG
TATGGCCATG TGTTGCGCAA TGCCATGCTG CTGGTGGTGG CTGGCCTGCC GCAGGCATTG
ATCACGGTAT TCTTCGCCGG CTCGCTGCTG ATCGAAGTGA TCTTCTCGCT CGATGGCCTG
GGCCGCATGA GCTATGAAGC AGCCGTGTCG CGAGATTACC CGGTGGTGTT CGGCACGCTG
TTCATCTTCA CCCTGGCTGG CCTGCTGATT CGCCTGATCG GGGACCTGTC GTACACCCTG
CTGGACCCGC GCATCGACTT CGACACGAGG GCGCACTGA
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| Protein sequence | MTAYLLRRLL LIIPTLLAIL LVNFAIVQAA PGGPVEQAVA RLQGLGGSAP GARAEVVHGE
SRATRGLDPK LIDEIKRQYG FDKSAPERLW LMLGQYARLD FGNSFFRGAK VTDLILDKLP
VTLSLGFWAT LITYLVSIPL GIRKAVRHGS RFDAWSSALI VIGYALPSFL FALLLIVLFA
GGTSLNWFPV RGLVSDNFDE LSLLGKVADY FWHLVLPVGA LVIGGFATLT LLTKNAFLDE
ISRQYVVTAR AKGLSERCVL YGHVLRNAML LVVAGLPQAL ITVFFAGSLL IEVIFSLDGL
GRMSYEAAVS RDYPVVFGTL FIFTLAGLLI RLIGDLSYTL LDPRIDFDTR AH
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