| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2786 |
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| Symbol | |
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| ID | 5870572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3131402 |
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| End bp | 3132463 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547904 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_001669016 |
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| Protein GI | 167033785 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.485042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.239997 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCTT CCAACCTCGC CCTGCCTCTG ACCCAGCCGC AAGCGGCCAA CACCACCGTC
AGCAAACGCC TGCCCAGCCC GCACCTGCTC AAGCAGCAGA TGCCACTGCC CAGCGAACTG
GCCCAGCAAG TCCAGGCCCA TCGCCAGGCT ATCCGCAACA TCCTCGAAGG CCGCGATCAG
CGCCTGCTGG TCATCGTCGG CCCCTGCTCG ATTCACGACC CTCGCTCAGC CCTGGAATAC
GCCGACCGCC TGGCCGCCCT CAGCCGCGAA GTCGATGACA AGCTGCTGCT GGTGATGCGC
GCCTACGTCG AAAAACCGCG TACCACAGTG GGTTGGAAAG GCCTGGCCTA CGACCCGCAC
CTGGATGGCA GCGACGACAT GCACTCGGGG CTTGCCTTGT CCCGTGGGCT GATGCTGAGC
ATGATCGAGC GCGGCCTGCC CATCGCCACC GAGCTGTTGC AACCGATGGC CGCCGGCTAC
TTCGATGACC TGCTGGCCTG GGCCGCGATT GGCGCACGCA CCACCGAATC GCAAATCCAC
CGCGAAATGG TCAGTGGCCT GGAGCTGCCG GTGGGCTTCA AGAACGGCAC CGACGGCGGT
ATTGCCATCG CCAGCGACGC CATGCGCAGC GCTGCCCACT CGCACCGCCA CTTCGGCATG
GATGCGCAGG GCCACCCGGC AATCATCGAT ACCCTGGGCA ACCCGGACAC ACACCTGGTA
CTGCGTGGCG GCCACAAAGG CCCGAACTAC GATGGCGACA GTATCGCCAT GGCCCGCCAG
GCATTGGCCA AAGCCGGCCT GCAGGCACGG ATCATGGTCG ATTGCAGCCA CGCCAACAGC
GGCAAGGACC CGGCGCGCCA GCCGGCCGTC TTCAATGATG TTTTGGCGCA GCGTCTGGCC
GGCGACCGTT CGCTGGTCGG CGTGATGATC GAGGGGCACC TGTTCGAGGG TTGCCAGGCG
CTGGGCAAGG GCGCACTGAA ATACGGCGTG TCGATTACCG ATGGCTGCCT GGGCTGGGCC
TCGACCGAAT CCCTGTTGCG CGAGGCGGCA CAAAAACTCT AG
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| Protein sequence | MQASNLALPL TQPQAANTTV SKRLPSPHLL KQQMPLPSEL AQQVQAHRQA IRNILEGRDQ
RLLVIVGPCS IHDPRSALEY ADRLAALSRE VDDKLLLVMR AYVEKPRTTV GWKGLAYDPH
LDGSDDMHSG LALSRGLMLS MIERGLPIAT ELLQPMAAGY FDDLLAWAAI GARTTESQIH
REMVSGLELP VGFKNGTDGG IAIASDAMRS AAHSHRHFGM DAQGHPAIID TLGNPDTHLV
LRGGHKGPNY DGDSIAMARQ ALAKAGLQAR IMVDCSHANS GKDPARQPAV FNDVLAQRLA
GDRSLVGVMI EGHLFEGCQA LGKGALKYGV SITDGCLGWA STESLLREAA QKL
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