Gene PputGB1_2783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2783 
Symbol 
ID5870569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3128531 
End bp3129826 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content65% 
IMG OID641547901 
Productmajor facilitator transporter 
Protein accessionYP_001669013 
Protein GI167033782 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.2175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.236028 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCCGC GTTTGCTGGC CATGGCGCTG GCGCCCCTGC TCGGGCTGTT CATCATCGCC 
CTGGGCAACG GCTTCATGTC TTCCCTGACC ACCCTGCGCC TGGGCGCTGC CGGTGAGTCC
GCCACCACCA TTGGTATCGT CTCGTCGACT TACTTCATCG GCCTGACCCT TGGTGCCATC
TTCAACGACC GGCTGATCCT GCGCATCGGC CACATCCGCG CCTATACCAG CTTCGCCTCG
CTGATCGCCG TGACCATCCT GCTGCAGGGG CTGTTCTATG ACGTCACCTG GTGGTCTGTG
CTGCGCCTGA TCAATGGCTG GGCGGCCGTC GGCGTGTTCC TGGTGATCGA AAGCTGGCTG
CTGCTGGCCG GTGACGCGAA AATCCGTGGT CGCTTGCTGG CGCTGTACAT GATCGCCTTC
TATGGTGCCG GGGTAATCGC CCAGGCCGGC CTTGGCGAAA TTACCCAGTT GGGCGAAACC
GCACCCTTCA TGCTGGCTGG CGTGCTGGCC GCCCTGTCGG TGCTGCCAAT CGTGATCCTG
CCGCGGGTGT CGCCGCTGTT GGACCAGGTC GAACCCCTCA AGCCCCGCCA ATTGCTGGGT
GTGGCGCCGT CGGGCCTGGT CGGTTGCTTT GGCTCGGGCG TGGCCATTGC CGGTATTTAT
GCGCTGCTGC CGCTGTACCT GCAACGCATC GGCCTGGAGG TAGGGGAAGT TGGCAACATG
ATGGCCTGGG TGATCCTGGG TGCCATGCTG CTGCAATACC CGGTCGGGCG CTGGTCCGAC
CGCAAGGACC GCCAAGATGT GCTGATTGCC CTGGCTGCGC TGTGCGTGGT GCTGTCGCTG
ATCACGGTGT TCCTGCCGTC GGACTCGTTC CTGCTGCCGG CCATGCTGTT CCTGCTCGGT
GGCGGCGTGT TCACCCTGTA CCCGGTGGCG GTCAGCCACG CGGCCGACCG CGCGCCTTCC
GATGCGCTGG TACCGATGAT TCAGGGCCTG CTGCTGATCA ACTCGCTGGG TTCGGCCATG
GCGCCGGTGG CCATTTCGCC GATGATGAGC GAATTTGGCG AGGCCGGGCT GTTCTGGGCC
TTTGCCGTGG TCAACCTGGC CATGGTGTGC TTCTTCATGT GGCGCCGTGG CAAGCGCCCG
GCCGCGGAGC ACCCAGCCCC GTTCACCGCT TCGACGACCT TCTCGCCAAC CGGCGCCGAG
CTGAGGGTGA CCGAAGACCT GATGCATGCG GCCCAGGAGC ATCCGCCGCT GGAGCCAGTG
GAGCCCGTGC AGGCTGCCCG TAGCGAAACG CACTGA
 
Protein sequence
MSPRLLAMAL APLLGLFIIA LGNGFMSSLT TLRLGAAGES ATTIGIVSST YFIGLTLGAI 
FNDRLILRIG HIRAYTSFAS LIAVTILLQG LFYDVTWWSV LRLINGWAAV GVFLVIESWL
LLAGDAKIRG RLLALYMIAF YGAGVIAQAG LGEITQLGET APFMLAGVLA ALSVLPIVIL
PRVSPLLDQV EPLKPRQLLG VAPSGLVGCF GSGVAIAGIY ALLPLYLQRI GLEVGEVGNM
MAWVILGAML LQYPVGRWSD RKDRQDVLIA LAALCVVLSL ITVFLPSDSF LLPAMLFLLG
GGVFTLYPVA VSHAADRAPS DALVPMIQGL LLINSLGSAM APVAISPMMS EFGEAGLFWA
FAVVNLAMVC FFMWRRGKRP AAEHPAPFTA STTFSPTGAE LRVTEDLMHA AQEHPPLEPV
EPVQAARSET H