| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2782 |
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| Symbol | |
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| ID | 5870568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3127229 |
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| End bp | 3128104 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641547900 |
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| Product | auxin efflux carrier |
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| Protein accession | YP_001669012 |
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| Protein GI | 167033781 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0679] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.350869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.279709 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGCGT CGTTGTTTGC AGTCCTGGCC CCGGTATTCA TCGTCGCCGG CATCGGCTAT
ATCTGGGCCC GCAAGGGCCT GGACTACCCC ACCGAGTTCA TCGCTCGGGT GGTGATGACC
GTTGGCACAC CGTCATTGGT ACTGTCCACC CTCAGCCGCA CCGAGCTGGA CCCCGCCGCC
TTCACCAGCA TGGCCATGGC CTGTCTGCTG TGCACCCTGG GCATGGCCAT GGCCGCTTTG
CTGGTGTGCC GCATTTCGGG GATGCACTGG CGGGTACTGC TGCCGGCGTT CATGTTCCCC
AACACCGGCA ACATGGGGCT GCCGATCAGC CTGTACGCCT TTGGTGAACA TGGCCTGGCC
CTGGCCGTGG CGTTCTTTCT CACCCTCTCG ATCGTGCAGT TCACCATTGG TATGGCCATT
TCCGGCACTG CCGCTTCGCT CAAGGCTTTG CTGCGCAACC CCATCGTGAT CAGCCTGGCC
GGTGCCATGC CGATCATATT TCTGGACTTC GAGCTGCCGC GCTGGCTGGC CAATACCGCG
GACTTGCTGG GTGGCATGAC CATTCCGCTG ATGCTGCTGA CCCTCGGGGT ATCGCTGGCC
AGCATTCGCC TGCGCCATGT TGGCAGTGGC ATGCTGCTGG GTGGTTTGCG CATTGGCCTG
GGGGCCGGGG TGGGCTGGGC GGTGGGCGCA GCGCTGGGTA TGGAGAGCCT GGAGCGTGCA
GTGCTGGTGG TGCAGTCGGC GATGCCGGTA GCCGTGTTCA ACTACCTGAT GGCGGTACGG
GCCAACCGTG AGCCGGAGCA GGTGGCAAAC CTGGTGATGT GCTCGACAGT GCTGTCGTTT
GCCTGGTTGC CGGTGGTGTT GGCCTGGTGG ATGTAG
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| Protein sequence | MFASLFAVLA PVFIVAGIGY IWARKGLDYP TEFIARVVMT VGTPSLVLST LSRTELDPAA
FTSMAMACLL CTLGMAMAAL LVCRISGMHW RVLLPAFMFP NTGNMGLPIS LYAFGEHGLA
LAVAFFLTLS IVQFTIGMAI SGTAASLKAL LRNPIVISLA GAMPIIFLDF ELPRWLANTA
DLLGGMTIPL MLLTLGVSLA SIRLRHVGSG MLLGGLRIGL GAGVGWAVGA ALGMESLERA
VLVVQSAMPV AVFNYLMAVR ANREPEQVAN LVMCSTVLSF AWLPVVLAWW M
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