| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2778 |
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| Symbol | |
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| ID | 5870564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3120521 |
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| End bp | 3123037 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547896 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_001669008 |
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| Protein GI | 167033777 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0742019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.349743 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCAC GCTCACCCTC TCCCACCGGT TTCGTCCGCG TCCGTGGCGC CCGCGAGCAC
AACCTGAAGA ACATCGATGT CGATATCCCT CGCGACGCCT TGGTGGTGTT TACCGGCGTG
TCCGGTTCGG GCAAGTCATC GCTGGCCTTC TCCACGCTTT ATGCCGAGGC CCAGCGCCGC
TATTTCGAAT CGGTAGCGCC CTATGCCCGG CGCCTGATCG ACCAGGTTGG CGTGCCCGAC
GTGGATGCCA TCGACGGCCT GCCGCCGGCA GTGGCCCTGC AACAGCAACG TGGTACGCCA
AGTGCCCGCT CTTCGGTGGG CAGCGTCACC ACCCTGTCCA GCTCGATCCG CATGCTCTAC
TCGCGCGCGG GCCACTACCC GGCCGGGCAA GCAATGCTGT ACGCCGAGGA CTTTTCACCG
AACACACCTC AGGGCGCCTG CCCGGAGTGC CACGGCATGG GCCGGGTTTA CCAAGTGACC
GAAGCGACCA TGGTCCCCGA CCCGTCGCTG ACTATCCGCG AGCGGGCGGT GGCCGCGTGG
CCGATGGCCT GGCAGGGGCA GAACCAGCGC GACATCCTGG TGACGCTGGG CTATGACGTG
GACATTCCCT GGCGCGACCT GCCCCAGGCG CAACGCGACT GGATCCTGTT CACCGAAGAA
ACGCCTACCG CGCCCGTGTA TGCCGGCTTG ACCCCAGCGC AGACCCGCGA CGCACTCAAG
CGCAAACTGG AGCCCAGCTA CCAAGGCACG TTCATGGGTG CACGGCGTTA CGTGCTGCAT
ACGTTCATGC ACTCGCAAAG CGCGCAGATG CGCAAGCGCG TGGCTCAGTA CATGCGCCCC
AGCCCCTGCC CGCTGTGCCA GGGCAAGCGC CTGAAGCGCG ACGCGCTGGG CGTGACCTTC
GCCGGCCTGG ACATCGCCGA GCTGTCGCAC CTGCCGTTGC AGGCGCTGGC CGAAGTGTTG
CGCAAGGTGG CGGCGGCAGA CTACCTGACA CTGCAGCAGG ATGAGCTGAC GCTGGAAAAG
CGCCTGGCCG CCCAACGCAT CGCCAACGAA CTGCTGGAGC GTATCGACAC ATTGCTCGGC
CTGGGCCTTG GTTACCTGGC ACTTGAGCGC AGCACCCCGA CGTTGTCCTC CGGCGAGCTG
CAACGCCTGC GCCTGGCTAC CCAGCTGAAT TCACAGTTGT TCGGCGTGAT CTACGTGCTC
GACGAGCCAT CGGCCGGTTT GCACCCAGCC GACAGCGAAG CGCTGTTCGA AGCCTTGCAA
CGCCTGAAGC ATGCAGGCAA CTCGGTGTAT GTGGTGGAGC ACGACCTGGA TACCATGCGC
CGCGCCGACT GGCTGGTGGA TGTAGGGCCG GCTGCCGGCG AGCATGGCGG TACCATTCTT
TACAGCGGGC CGCCTGCGGG CCTGGCCGAG GTCGAGCAGT CATGCACCCG TGCCTACCTG
TTCAGCGCCC CGCCCCAGAC CAAACGCGCC CCCCGTCAGC CCTGCGACTG GCTGAAGCTT
GAAGGCATCA CGCGCAACAA CCTCGATAAC CTCAGCGCTG CCTTCCCGCT GGGCTGCTTC
ACCGCCGTTA CCGGTGTTTC CGGTTCTGGC AAGTCCAGCC TGGTCAGCCA GGCCCTGCTG
GAACTGGTAG GGGCACACCT GGGTCATGCC GAGCAACGTG GCGAGCCCGA AGAACACAGC
CTGGAAGACG AACCTGATCA GGCCAGTAGC GGCCAGGTGA GTGCGGGGCT TGGCAGCATC
AAGCGCCTGG TGCAGGTCGA CCAGAAGCCA ATCGGCCGCA CACCGCGCTC CAACCTGGCC
ACCTATACCG GCCTGTTCGA CCATGTACGC AAGCTGTTCG CCGCCACCGA GCAGGCCAAG
GCGCAGGGTT TCGACGCTGG GCGTTTTTCT TTCAACGTTG CCAAGGGCCG CTGCGCCAAC
TGCGAGGGTG AAGGTTTCGT CAGCGTCGAG TTGCTGTTCA TGCCCAGTGT CTACGCGCCC
TGCCCAACCT GCCATGGCGC CCGCTACAAC CCCGAAACCC TGGCGGTGAG TTGGCAAGGC
ATGAACATCG CGCAAGTGCT GCAGATGACC GTCGACCAAG CCCTGCAGGT ATTTGCCGAA
CAGCCACCGG TGCGACGTTG CCTGCAAGTG CTGCAGGATA TCGGCCTGGG CTACCTGCGC
CTGGGCCAAC CGGCCACCGA GCTGTCCGGT GGCGAGGCGC AGCGGATCAA GCTGGCTACC
GAACTGCAAC GCATCGCCCG CGGGGCAACG CTGTATGTGC TGGATGAGCC CACCAACGGT
TTGCACCCGC AGGACATCGA CCGGCTGCTG GTGCAGTTGA ACCGCCTGGT CGAGGGCGGG
CACAGCGTGG TAGTGGTCGA GCACGACATG CGTGTGGTGG CGCAAAGCGA CTGGGTGATC
GATATTGGGC CGGGAGCTGG CGATGCCGGG GGCAAGGTGG TGGTCAACGG CATCCCGCAA
GTCGTGGCTG GCTGTAGCGA AAGCCGTACA GCGGCGTTTC TGGCCAAAGC CTTGTAG
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| Protein sequence | MPPRSPSPTG FVRVRGAREH NLKNIDVDIP RDALVVFTGV SGSGKSSLAF STLYAEAQRR
YFESVAPYAR RLIDQVGVPD VDAIDGLPPA VALQQQRGTP SARSSVGSVT TLSSSIRMLY
SRAGHYPAGQ AMLYAEDFSP NTPQGACPEC HGMGRVYQVT EATMVPDPSL TIRERAVAAW
PMAWQGQNQR DILVTLGYDV DIPWRDLPQA QRDWILFTEE TPTAPVYAGL TPAQTRDALK
RKLEPSYQGT FMGARRYVLH TFMHSQSAQM RKRVAQYMRP SPCPLCQGKR LKRDALGVTF
AGLDIAELSH LPLQALAEVL RKVAAADYLT LQQDELTLEK RLAAQRIANE LLERIDTLLG
LGLGYLALER STPTLSSGEL QRLRLATQLN SQLFGVIYVL DEPSAGLHPA DSEALFEALQ
RLKHAGNSVY VVEHDLDTMR RADWLVDVGP AAGEHGGTIL YSGPPAGLAE VEQSCTRAYL
FSAPPQTKRA PRQPCDWLKL EGITRNNLDN LSAAFPLGCF TAVTGVSGSG KSSLVSQALL
ELVGAHLGHA EQRGEPEEHS LEDEPDQASS GQVSAGLGSI KRLVQVDQKP IGRTPRSNLA
TYTGLFDHVR KLFAATEQAK AQGFDAGRFS FNVAKGRCAN CEGEGFVSVE LLFMPSVYAP
CPTCHGARYN PETLAVSWQG MNIAQVLQMT VDQALQVFAE QPPVRRCLQV LQDIGLGYLR
LGQPATELSG GEAQRIKLAT ELQRIARGAT LYVLDEPTNG LHPQDIDRLL VQLNRLVEGG
HSVVVVEHDM RVVAQSDWVI DIGPGAGDAG GKVVVNGIPQ VVAGCSESRT AAFLAKAL
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