| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2777 |
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| Symbol | |
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| ID | 5870563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3119309 |
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| End bp | 3120406 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641547895 |
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| Product | ImpA family type VI secretion-associated protein |
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| Protein accession | YP_001669007 |
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| Protein GI | 167033776 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03363] type VI secretion-associated protein, ImpA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.30494 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.238227 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAAA TCCTCAATGA CCTCTCGCTG GCCACACTGG CCGCACCCAT CGAAGGTGGC
AGTGGCGAAG ACTTGAGCTT CTCTGCCTTG TTCGACCAGA TCAAGGAAGC CCGCCGGGCG
GACCCTGACT ACCTGACCCA GGGCGACTGG CAAACCGACT TGAAGACTGC CGACTGGGAG
CAGGTAATCA ACCTGTCGGC TCAAGGGTTG GCGCAGCAAA GCAAAGACTT GATGCTGGTG
GCCTGGCTCA GCGAGGGCCT GGCCCAGCGT GAGCACTTCG AAGGCATCAC TTTTGGCCTA
GAGCTGACCG AACAGCTTCT GGATACCTTC TGGGACACCC TGTTCCCAAC GCTTGAAGAC
GGCCTGGACG AGCGCGCGGC GCGGCTGTCC TGGCTGAAGA CCACGCTCAC CGACATTGCC
GGTGGCTTGC CCATTACCCA AGGGCAGCAT TTTGGCGTGT TGCGCTATGA CGAGTCACGC
CACGTCGAAA ACCTCGCCCT GCAGAACCCC AAGGCAATGC AGACAGCACT GAACGAAGGC
AAGATCAACG CCGAGATTTT CCAGCGCTCG GTAGCGCTGA GCGACACTGA TCACCTGCGT
GCCAAGGCGC TGCAGATCGG CACCAGCCTG AATGCGTGCA AACGCCTGCA GGCCAGCGCC
GACCGCCTGT TCGGCCACGA GGCGCCCAGC TTCGCCAGCC TTGCCGACAT GCTGTCGCGC
GCCAGCCAGC TGGCGGAGAA ACTGCTCAAG GATCGCGGCG TCGAGCTGCA CCCCGCAGCG
GTGGCGGTAG CAGAACCCGA GGCCATCTTT GTCTCTACTG ACGCAGCAGG TGAACCGATG
AACACGCCCG TCCAGGCCTC TGCGCCTGCC CCTATGCGCA CGACACCACT GACCCGCGAC
GAGGCTTTCA CCATGCTTGC GGGCATCGCC CAGTTTTTCA AGCAAAGCGA GCCGCAGAGC
CCGGTACCTT ACTTGATCGA ACGTGCGATC AAGTGGGGCA ACATGCCGTT GGAGGGCTGG
CTGAGCGATG TGATCAAAGA CAGCAACGTG GTGGACAACA TTCGTGATGT GCTAGGCACT
CGCGAACCAA GGTCCTGA
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| Protein sequence | MPEILNDLSL ATLAAPIEGG SGEDLSFSAL FDQIKEARRA DPDYLTQGDW QTDLKTADWE
QVINLSAQGL AQQSKDLMLV AWLSEGLAQR EHFEGITFGL ELTEQLLDTF WDTLFPTLED
GLDERAARLS WLKTTLTDIA GGLPITQGQH FGVLRYDESR HVENLALQNP KAMQTALNEG
KINAEIFQRS VALSDTDHLR AKALQIGTSL NACKRLQASA DRLFGHEAPS FASLADMLSR
ASQLAEKLLK DRGVELHPAA VAVAEPEAIF VSTDAAGEPM NTPVQASAPA PMRTTPLTRD
EAFTMLAGIA QFFKQSEPQS PVPYLIERAI KWGNMPLEGW LSDVIKDSNV VDNIRDVLGT
REPRS
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