Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2775 |
Symbol | |
ID | 5870561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3116067 |
End bp | 3118562 |
Gene Length | 2496 bp |
Protein Length | 831 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641547893 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_001669005 |
Protein GI | 167033774 |
COG category | [S] Function unknown |
COG ID | [COG3523] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.414663 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.366632 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGA TCAAGTACTA CTGCCTGCGC TACCAACCCT ACCTGCTGGG TGTGGCATTC TTCCTGGCGA TCTTCCTGGT CTGGGCCATC GGCCGTGCAT TGGGCTTTGC CTCGCTGCAC AGCTTGCTGG CGGGTATCGG TGCGTTTCTG CTGCTGTCGG CGGGCTATGT ACTGTTGCTG TACCGCGGTG CTGGCCAGCA CCACAACCTC GAAGGCCTGC TGCGCGACGA CGCCGACCAG GCCGTACTCA GCGCCACCCC GGCCGACCGG GAAGAGGTCA GCCTGTTGCG CGAGCGCCTG CTGCAGAGCA TCGAGCGCCT GCACAGCAAC AAAGCGCGCG GCGCCTCGGC CAAGGACGCG CTGTATGCCC TGCCCTGGTA CCTGGTGATC GGCCAGCCGG CCGCGGGCAA GAGCACGATG ATTCTGCAGT CGGGCCTGAA CTTCCCCTAC GCCGAGCGCG AAGGCGCACG GGTCGCAGGC CTGGGCGGCA CGCGCAACTG CGACTGGTTC TTCAGCTCCG AAGCGGTGCT GCTGGACACC GCCGGGCGCT ACATGAACAG CCCCGAAGAA GCCGGCAAGT GGCGTGGCTT CTTGCAACTG CTGCGCCAGC ACCGCCAGCG CCGCCCGCTC AACGGTTTGA TCGTCAGCGT CAGCATCGCC GACATCCTGC ATGGCTCGGC CGAGGACCAG GAGCGCGTGG CCAAACGCCT GCGCGAACGC ATCCAGGAAA GCTGCGCACT GCTCGAAGTG CGCCTGCCCA TCTATCTGGT CTTCACCAAG TGCGATCTGA TCCCCGGTTT CACGCCGTTC TATCGCCAGC TGGACGACGC TGCGCGTGGT GAAGTGATGG GCAAAACCTT CTCGCACAAG GGTTACGAGC AGGCCGACTG GGGCCAGCGC TTTGGCAACG CGATGGACGA GCTGGCCAGT TACTGGCGAC AGGTGGCTGG CCAACAACTG GTACACCAGG ACATTCAGGT CACTCGGCAG AACAACGCGG CCTATCGCTT CCCGCTGGAG CTGGCCGCGC TCAAGCCGCG CCTGCAGCAA TTCGTCGACA GCCTGTTGCG TGCCAACCCC TACCAGAATG CAGAGTTGCT GCGCGGGTTC TATTTCACCG CTGCGCTGCA AGCCGACGAG GCCCAGTGGG GCAGCCACGG CCAGCATGTG GCCGAACGCT TCGCACTCGA GCAGGTTGAA GGTTCTGGCA CTGCCGGCAG CCAGCCAGCC CCCCTGTTCA TCAACAGCCT GTTCCGCAAG GTCATCATTC CCGACCAGCA CCTGGTGGCG CTGTACACCA GCAACCACCG CGAGCGCCGG CGCAAGGCCG GGTGGGTTGG CGCCGCCGGC CTGGCAGCGC TGGTGCTCTG CAGCCTGTGG GGCTGGTCGT ACCTGAACAA CCGCGCCACC CTAGCCAGCA TTGCCGGCGA GCTGGCTCAG GCCAAGGCCG ACGACCAGGC TGGCAGCGGC CAGTACACCG CCTGGAGAAG CCTTGACCGC TTGCGCTTCT GGGCCGCGCA CTACTATCAG CAACACCACG AGCAGGGCGT GCCGCTTGGC ATGCGCCTGG GCTTGTACCA GGGCCATGCG GTCGAGCCGC TGCTGCGCAG CCGCTACTTC GCCACGCTGC AGAACGTGAT GCTCAAGCCC ACGGCCGATA ACCTGACCCG TACCCTGTAC CTGTTGACCA CGCTCAAGGT CTACCAACGC AACACCCGCG AGCTGCAGCC GGTAAGCGGC GTCGACAGCG TCGAGGCCGA GGCGCTGCCG CATGACAACC GCGCCCAGTC GATCGCCGAC TTCGGCAAAG CGACCCTGGA CACCTACGTG ATGCTCTCGC AGGCAATGCG CGAGAAGGCT GACCCTGCGT TCCTCAAGGC GCACCTACCG GACTACTGGT ACCCGGCCAT CGCCCGCCAC ACCGGCAAGC GCATGGCCGC AGCCGGTAGC GACGCCAGCG GCGACCAGGA CTACCTGTAC GCCAGCCGCC AGATCACCTT CTACAGCGAC CAGATCCGTG AGCCGGACGT GCCACGCATC CTCGACAACG CCTTCCTGAT GTCCAGCTCA CGCAACTACA TCGACAGCCT GCGGGCCCAG TCGCTGCGCT CGATCGAGAC CATCACGCTG GAATCCGACA CCCTGTTCGC CTTTGGCCGC GCCGACTTCC AGAGCCTGAA GAACGAAGGC CAGAACCAAC TGAGCGCGAT TGCCAGCAAG CTGTTGAACA CCCCGAACAT CGGCAAGGTG GTCATCTCTG GCCACGCCGA TCAGCTCGGC GACAGCCAGG GCAACCTGCA GGTTTCGAAG CAACGGGCGC AAACCATCCG CACCTACCTG GTCGGCAAGG GCGTGCCCGC CGAGCTGGTG GTCGCGCAAG GCGAAGGCAG CCGCAAACCA CTGGTCAACT GCGACATGCA ACAACCGCGG GCGCAATTGA TCAAGTGCCT GGAGCCCAAC CGCCGGGTGG AAATCGAAGT GCGTGGGCTG AACTGA
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Protein sequence | MNKIKYYCLR YQPYLLGVAF FLAIFLVWAI GRALGFASLH SLLAGIGAFL LLSAGYVLLL YRGAGQHHNL EGLLRDDADQ AVLSATPADR EEVSLLRERL LQSIERLHSN KARGASAKDA LYALPWYLVI GQPAAGKSTM ILQSGLNFPY AEREGARVAG LGGTRNCDWF FSSEAVLLDT AGRYMNSPEE AGKWRGFLQL LRQHRQRRPL NGLIVSVSIA DILHGSAEDQ ERVAKRLRER IQESCALLEV RLPIYLVFTK CDLIPGFTPF YRQLDDAARG EVMGKTFSHK GYEQADWGQR FGNAMDELAS YWRQVAGQQL VHQDIQVTRQ NNAAYRFPLE LAALKPRLQQ FVDSLLRANP YQNAELLRGF YFTAALQADE AQWGSHGQHV AERFALEQVE GSGTAGSQPA PLFINSLFRK VIIPDQHLVA LYTSNHRERR RKAGWVGAAG LAALVLCSLW GWSYLNNRAT LASIAGELAQ AKADDQAGSG QYTAWRSLDR LRFWAAHYYQ QHHEQGVPLG MRLGLYQGHA VEPLLRSRYF ATLQNVMLKP TADNLTRTLY LLTTLKVYQR NTRELQPVSG VDSVEAEALP HDNRAQSIAD FGKATLDTYV MLSQAMREKA DPAFLKAHLP DYWYPAIARH TGKRMAAAGS DASGDQDYLY ASRQITFYSD QIREPDVPRI LDNAFLMSSS RNYIDSLRAQ SLRSIETITL ESDTLFAFGR ADFQSLKNEG QNQLSAIASK LLNTPNIGKV VISGHADQLG DSQGNLQVSK QRAQTIRTYL VGKGVPAELV VAQGEGSRKP LVNCDMQQPR AQLIKCLEPN RRVEIEVRGL N
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