Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2759 |
Symbol | |
ID | 5870545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3093554 |
End bp | 3094147 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641547877 |
Product | hypothetical protein |
Protein accession | YP_001668989 |
Protein GI | 167033758 |
COG category | [S] Function unknown |
COG ID | [COG5435] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0593417 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.826436 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCGGTA ATATCTACGA CCGATTAGCT GAGCGACGCG AGCGCGAAGA GCGCGTTGAA CGTGAGCGTC TGGAAGAGGG CGCTCTCAAT GTAGAACCTC CTCCGCCGGA GCGCTTTCTT ACAAATGAAT TGAGCTTCGT TCGTCCAGAG AACTTAAAAG ACAAGACTTT TCATGTTTTT ACATTGACGG ATATAGGGCC AAGCCCGTTC TCGCTCGTTG TTGGGCGTTC GCCTGCGGAG CAGGATGCAG ACTTGGAGAC GCTTGCACAA CAACTGCTGG GTGAATTGAA AAAGACGTTG TCCCATGTTC AGTGGATCGA GCCGGTTACC CCGGTAGAGG TGGCTGGGTT GGAGGCGCGG CGTGTAGAGT TTCGCTGGCG GCAACAAGGC CAACCGGTTC ATCAAGTACA GCTGATTTTT CTGCATCACG ATGAGCACAA GCGCCCTTTG CTCATGCAGA TTACCGGTAC GAGTAACAAT GCCAAAGGCA TGACAGAAGA TGAGCGTAGT GCTTTCAATA CTTTAGTTGA TAGTCTTCAA TTGCGCCTTC CGCCTGCGAG AGAGGGGGAT GCGCAACAGG TCGAGTCGGC ATGA
|
Protein sequence | MRGNIYDRLA ERREREERVE RERLEEGALN VEPPPPERFL TNELSFVRPE NLKDKTFHVF TLTDIGPSPF SLVVGRSPAE QDADLETLAQ QLLGELKKTL SHVQWIEPVT PVEVAGLEAR RVEFRWRQQG QPVHQVQLIF LHHDEHKRPL LMQITGTSNN AKGMTEDERS AFNTLVDSLQ LRLPPAREGD AQQVESA
|
| |