Gene PputGB1_2749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2749 
Symbol 
ID5870537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3083096 
End bp3083968 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content63% 
IMG OID641547870 
ProductAraC family transcriptional regulator 
Protein accessionYP_001668982 
Protein GI167033751 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.981488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.351056 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAA TCCCCAATTA CGCCCTGTAC GGTGAAACCG CACAGCCGGT GTGGCACGAA 
GCCCTGCACG TGGAGCAGAT TTCCCAGCGC TCTGGCGCGC ACAACTGGGA AATCGCCGCA
CACCGTCACG AAGGCTTGCT GCAGCTGCTG TACCTGCAAA GCGGTGGCGG TGAAGTGCTG
TTCGACAGTG ACCGGTTGCA GGTTCATGCG CCTTGCGTGG TGTATGTGCC GGCGCAAGTG
GTGCATGGCT TTCATTGGGC CGGCCAGGTC GAGGGCCAGG TGATCACTGC CGCGCAACAC
CCGCTGGAGA GCATCGCCCA GGTGCTGGCG CCCAACCTGC TGGTGCAACT TCGCAAACCG
CAGGTGGTCG CCCTGCCGAA ATGGGCCGCT GATGAAGACC CGTTGCTGCC ACTGTGCCGG
GCCCTGCGCG AGGAATACCA CAACCGCGCC CGCGAGCATG TGGCCAGCAG CATGGCGCTA
TTGCTGACGC TGATGATCCA GGTGCTGCGC CATGAGCCGC ACTTGCCCCA GGGAGAGCAG
CGCCCGGTGT CCAGGCGCAG CCAGCAGTTG ACCGCTTTTC GCGAGCTGGT GGACCTGCAC
TACCGCGCGC ACAGGCCACT GGCAGACTAC GCCGCCGAAC TGGGCATGAC CCTGGCGACG
TTGGGGCGGT TATGCCAGGA GCACCTGGGC ATGACCCCCA TGAACGTGAT CAATGCCCGC
CAGGTGCTGG AGGCCAAGCG CATGCTTGGG CATTCGAGCC TGAGTGTGAA AGAGATCGCC
CACGAACTGG GGTTTGCCGA TGTGGGGTAT TTCAGCCGGT TCTTTCGCAA GCAGGCTGGG
GTGAGCCCGA GTGCTTTCCG TGAAGGCCAT TGA
 
Protein sequence
MNKIPNYALY GETAQPVWHE ALHVEQISQR SGAHNWEIAA HRHEGLLQLL YLQSGGGEVL 
FDSDRLQVHA PCVVYVPAQV VHGFHWAGQV EGQVITAAQH PLESIAQVLA PNLLVQLRKP
QVVALPKWAA DEDPLLPLCR ALREEYHNRA REHVASSMAL LLTLMIQVLR HEPHLPQGEQ
RPVSRRSQQL TAFRELVDLH YRAHRPLADY AAELGMTLAT LGRLCQEHLG MTPMNVINAR
QVLEAKRMLG HSSLSVKEIA HELGFADVGY FSRFFRKQAG VSPSAFREGH