Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2749 |
Symbol | |
ID | 5870537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3083096 |
End bp | 3083968 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641547870 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001668982 |
Protein GI | 167033751 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.981488 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.351056 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAAA TCCCCAATTA CGCCCTGTAC GGTGAAACCG CACAGCCGGT GTGGCACGAA GCCCTGCACG TGGAGCAGAT TTCCCAGCGC TCTGGCGCGC ACAACTGGGA AATCGCCGCA CACCGTCACG AAGGCTTGCT GCAGCTGCTG TACCTGCAAA GCGGTGGCGG TGAAGTGCTG TTCGACAGTG ACCGGTTGCA GGTTCATGCG CCTTGCGTGG TGTATGTGCC GGCGCAAGTG GTGCATGGCT TTCATTGGGC CGGCCAGGTC GAGGGCCAGG TGATCACTGC CGCGCAACAC CCGCTGGAGA GCATCGCCCA GGTGCTGGCG CCCAACCTGC TGGTGCAACT TCGCAAACCG CAGGTGGTCG CCCTGCCGAA ATGGGCCGCT GATGAAGACC CGTTGCTGCC ACTGTGCCGG GCCCTGCGCG AGGAATACCA CAACCGCGCC CGCGAGCATG TGGCCAGCAG CATGGCGCTA TTGCTGACGC TGATGATCCA GGTGCTGCGC CATGAGCCGC ACTTGCCCCA GGGAGAGCAG CGCCCGGTGT CCAGGCGCAG CCAGCAGTTG ACCGCTTTTC GCGAGCTGGT GGACCTGCAC TACCGCGCGC ACAGGCCACT GGCAGACTAC GCCGCCGAAC TGGGCATGAC CCTGGCGACG TTGGGGCGGT TATGCCAGGA GCACCTGGGC ATGACCCCCA TGAACGTGAT CAATGCCCGC CAGGTGCTGG AGGCCAAGCG CATGCTTGGG CATTCGAGCC TGAGTGTGAA AGAGATCGCC CACGAACTGG GGTTTGCCGA TGTGGGGTAT TTCAGCCGGT TCTTTCGCAA GCAGGCTGGG GTGAGCCCGA GTGCTTTCCG TGAAGGCCAT TGA
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Protein sequence | MNKIPNYALY GETAQPVWHE ALHVEQISQR SGAHNWEIAA HRHEGLLQLL YLQSGGGEVL FDSDRLQVHA PCVVYVPAQV VHGFHWAGQV EGQVITAAQH PLESIAQVLA PNLLVQLRKP QVVALPKWAA DEDPLLPLCR ALREEYHNRA REHVASSMAL LLTLMIQVLR HEPHLPQGEQ RPVSRRSQQL TAFRELVDLH YRAHRPLADY AAELGMTLAT LGRLCQEHLG MTPMNVINAR QVLEAKRMLG HSSLSVKEIA HELGFADVGY FSRFFRKQAG VSPSAFREGH
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