| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2747 |
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| Symbol | |
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| ID | 5870535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3080376 |
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| End bp | 3082094 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547868 |
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| Product | putative succinate dehydrogenase |
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| Protein accession | YP_001668980 |
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| Protein GI | 167033749 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.402844 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACGC GTAGCTGCGA TGTACTGGTG ATCGGTGCGG GGGCTGGCGG CCTGGCGACA
GCCATCACGG CGAAAAAGCT TGGCCTGGAT GTCATCGTCA TTGAAAAGGA CGACTGCTTT
GGTGGCACCA CGGCGTTTTC CGGTGGCGTG TTGTGGGTGC CGGGCAACCC GCACGGGGCC
GAGGACAGCC ATGCAGCGGC CATGACCTAC CTGCGCAACG AAGCCGGTGC CTGTTTCGAT
GCGGCGGGGG TGGAAGCCTT CTTGCGCTAC GCGCCGCAGA TGGTGGCGTT TTTCGAGCGC
GAAACGGCGG TCAAGTTCGT GCCCACGCTG TACCCCGATT ACCACCCACA GGTGGAGGGC
GGTGTCGATG TGGGCCGCTC GATACTGGCC GCTCCTTACG ACATTCGTGG CCTGGGGCCG
GACATGGCGC GCCTGCGCCC GCCGCTGAAG ACCATCACGT TCATTGGCAT GATGTTCAAT
TCGTCGAATG CCGACCTCAA GCATTTCTTC AATGTCACCC GCTCGCTGAC TTCGTTCGTG
TATGTGGCCA AGCGCCTGAT AACCCATTTG AAGGAGCTTG CCCTGTACCG ACGTGGCACC
CAGGTCACCA GCGGCAATGC CCTGGCAGCG CGGCTGGTAC GCTCGGCACT GGACCTGGGC
ATCCCGATTC TCACAGGTAC ACCGGCGCGG CAACTGCTGC ATGAAGAGGG TCGAGTGACA
GGGGCATTGG TCGGGCAGGC TGACAGCGAG CAGCGCATTC AGGCCCGGCG TGGGGTGGTA
CTGGCCTGTG GCGGTTTCTC CCATGATTTG CAACGGCTGC GCCAGGCCTA CCCGCATGTG
CGGCGTGGCG GCGAGCATTT TTCGCCGGTG CCGGCGGGCA ATACCGGTGA CGGTGCGCGC
ATGGCCGAGG CGTTGGGGGC CAAGGTCGAT ATCCGCCTGC AGGCAGCAGC CGCCTGGATG
CCGGTATCGA AGGTGCCAGT GGCTGGCGGG CGGCACATTG CCTTTCCGCA TTTGCTCGAC
CGCTACAAGC CAGGTGTGAT CGGCGTGCTG CGTTCGGGGC AGCGTTTCAC CAACGAGTCG
AATTCTTACC ATGACGTGGG CACAGCATTG ATCGAAGCCT GCGCCGGTCA GGCAGAAACC
GCCATGTGGC TGGTGTGCGA CCGCCGCACC CTGGCCAAGT ATGGCCTGGG CTTTGCCAAG
CCTGCACCGA TGCCGTTGGG GCCCTTGTTG CGTAATGGTT ACCTGCTCAA GGGCAAGACC
CTGGCCGAGC TGGCGGGCAA GGCCGGTATC GACGCGCAAG GGCTGCAGCA GACCGTGCGC
GAATACAACC TTGGCGCGGT GCAGGGCGAA GACCGCCAGT TCGGTCGCGG CAGCACCAGC
TTCAATCGCT ACCTGGCCGA CCCGCAGCAA CAGCCCAACC CGTGCGTGGC GCCGGTGGGC
GAAGGGCCGT ACTTTGCCGT GAAGGTGATC ATGGGCGACC TGGGCACCTT CGACGGGCTA
CGCACCAGCG TGGTCGGTGA AGTATTGGCG GCCGATGGGC AGGCCATCGA CGGCCTGTAC
GCGGTGGGTA ACGACCGAGC CAGCATCATG GGCGGCAACT ACCCCGGTGC CGGCATCACC
CTGGGGCCGA TCATGACCTT TGGCTACATC ACCGGGCGCC ATCTGGCGGG TGTCGAGCAG
GGCCTGGCGG CTGCGGGCAA AGCGCGGGAG GTGGCGTGA
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| Protein sequence | MNTRSCDVLV IGAGAGGLAT AITAKKLGLD VIVIEKDDCF GGTTAFSGGV LWVPGNPHGA
EDSHAAAMTY LRNEAGACFD AAGVEAFLRY APQMVAFFER ETAVKFVPTL YPDYHPQVEG
GVDVGRSILA APYDIRGLGP DMARLRPPLK TITFIGMMFN SSNADLKHFF NVTRSLTSFV
YVAKRLITHL KELALYRRGT QVTSGNALAA RLVRSALDLG IPILTGTPAR QLLHEEGRVT
GALVGQADSE QRIQARRGVV LACGGFSHDL QRLRQAYPHV RRGGEHFSPV PAGNTGDGAR
MAEALGAKVD IRLQAAAAWM PVSKVPVAGG RHIAFPHLLD RYKPGVIGVL RSGQRFTNES
NSYHDVGTAL IEACAGQAET AMWLVCDRRT LAKYGLGFAK PAPMPLGPLL RNGYLLKGKT
LAELAGKAGI DAQGLQQTVR EYNLGAVQGE DRQFGRGSTS FNRYLADPQQ QPNPCVAPVG
EGPYFAVKVI MGDLGTFDGL RTSVVGEVLA ADGQAIDGLY AVGNDRASIM GGNYPGAGIT
LGPIMTFGYI TGRHLAGVEQ GLAAAGKARE VA
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