| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2744 |
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| Symbol | |
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| ID | 5870532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3076505 |
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| End bp | 3078565 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641547865 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001668977 |
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| Protein GI | 167033746 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.339912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACGTCA AGAAAAGTAC ACTGGCACTG GCAGTGGGCT CGGCCCTGTG CCTGGCAAAC
AATGCCTGGG CAGCAGCACC GGTTGGGGCG GTGGAGCTGG AACAGATCAC GGTGACCGGG
GAAAAGATCA ACCGCACCCT GGAGCAGACC CAGTCGAGTG TAGTCGTGAT CACCGACAAG
CAACTGCGCG AGAAGGAAGA CCACAACCTG GTCGATGTGT TTGCGCGCAC GCCCGGTGTG
TACAACCAGT CTGGCAATGA AAACTGGGGG ATCCGCGGCG TACCCGTATC CGGCTTCGAA
GACCAGGGCC CTGCCACACT CAATGGTGCG GTGTCGGTGT TTGTCGACGG CGCTGTACAA
CCCAACCGCG CCTTGACCTT GAGCCCCATG CCGCTATGGG ATACCGAGCA GGTTGAAGTG
TTTCTCGGTC CGCAATCCAC GACCCAGGGC CGCAACTCCT TGGCGGGTGC GGTGGTGATC
CAGACCCGTA ACCCAACCTT CGACCCCAGC TTTTCGGCGC AGACCAACAT GGGGAATTAC
GGCGAACGCG GGGCGGCCGT GGCCGGTGGC GGTGCGTTGG TCGACAACAA GGTCGCTGGC
CGCATTGCCG TGGACTATCA GGAAGGCGAT GGCTACATCG ACAACACCAC CCTGCATGAC
GATGCCAACC CCACCCGTAC CGCCAATGCC CGTGGCAAGT TGCTGATCCT GCCCAGCGAC
GACCTCGACA TCCTGCTGAC CTACGCCCAC GGTGAAAGCC GCAAGGGGGA TAACACGGTC
ATGCGGCAAA ACGGCAAGGT TCGCTATTAC AAGATGACCT CCGACACCAA GGCCTTCGAC
AAGCTGCAGC AGGACACGGT CAGCGCCAAG GTCGACTATC GGCTGGACGA TTACTGGTCG
CTGACCAGTC TTACCGCCAA CACAAGCTCG GACTACGACG CACGCCTGGA CTTCGACCAG
TCGGCCGACG CCAACCAGGT GGTGTTGCGT CAGCAGGACG GCAACCTGTT CAGCCAGGAA
CTGCGCCTGA ACTACAACGG CGACACCTTG AAGAGCTTCG TCGGGGCCTA CTACGGGCAC
AACACCAACG ATTTCCATGA TCGCCTGCTC TTCGACAACC AGCTGTTCGG CACTGCCAAG
GGCGATACCA CAATTGAAAA CCAGGCGCTG TTCGGCGAGA TCAACTGGAC CTTCGTACCG
AGCTGGACAC TGATCACTGG TTTGCGATAC GACCACGAAA CCAATGACAC TGACATTGAC
CAGGACGACT TCTCCAGCCC CGGAAAGGTC AGCAAATCGT TTGATGCGGT TCTGCCCAAG
CTTGGCCTGG ACTATGAATT GGCCGATGGG CAGTACCTGG GCTTCATGGT GCAGAAGGGT
TATCGCGGTG GCGGTGTGAA CATGCGTGCC GGTGGCGGTC ACGAGGCCTA CGACCCGGAA
TACACCACAA ACTACGAGTT GTCTTACCGG GGCTCGTTAC TTGACGATAC GCTGCGCACC
CGCGCCAACC TGTACTACAC CGACTGGAAA GACCAGCAGG TCAGCGTGCT GGACCCCAAC
ATCGAGTTCG TCCATGTGTT CAATGCCGGC CGCAGCGATA TCAAGGGCCT GGAAGTGTCG
GTCGAGAAAG ACCTGGGCCA GCAGTTGACC CTCAACGGTG CAGCCTCGGT AACCGTTGGC
AAGTACAAGG ACTTCGTGAC CGGCGATGGT CGCGACATGA GTGGCGAAGA CTTCCTCTAC
TCGCCCAAAT ACAAGATGTC GCTGGGCGCG ACCTACCGTT GGAACGAGCG CCTCACCCTC
AACACCGACC TCGTCTACCA GAGCACGTCG CCCTCCGAGT ACGAGTTTGA TGACGCCGGG
CAGGTCACCG ACGAGCGTCG CAGCGACAAT TATTGGCTGG TCAACTTCAA TACCGAGTAC
AAGATTACCC GCAACATTGC CGTGTCCGGT TTTGTGAAAA ACGCCTTCGA CAAGGAATAC
ATCACCAACA ATCGCAGCGG CGACATCCTC GATGTGGGCG CCCCGCGCAC GGTAGGCCTG
GCGTTGCGTT ACGACCTTTG A
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| Protein sequence | MDVKKSTLAL AVGSALCLAN NAWAAAPVGA VELEQITVTG EKINRTLEQT QSSVVVITDK
QLREKEDHNL VDVFARTPGV YNQSGNENWG IRGVPVSGFE DQGPATLNGA VSVFVDGAVQ
PNRALTLSPM PLWDTEQVEV FLGPQSTTQG RNSLAGAVVI QTRNPTFDPS FSAQTNMGNY
GERGAAVAGG GALVDNKVAG RIAVDYQEGD GYIDNTTLHD DANPTRTANA RGKLLILPSD
DLDILLTYAH GESRKGDNTV MRQNGKVRYY KMTSDTKAFD KLQQDTVSAK VDYRLDDYWS
LTSLTANTSS DYDARLDFDQ SADANQVVLR QQDGNLFSQE LRLNYNGDTL KSFVGAYYGH
NTNDFHDRLL FDNQLFGTAK GDTTIENQAL FGEINWTFVP SWTLITGLRY DHETNDTDID
QDDFSSPGKV SKSFDAVLPK LGLDYELADG QYLGFMVQKG YRGGGVNMRA GGGHEAYDPE
YTTNYELSYR GSLLDDTLRT RANLYYTDWK DQQVSVLDPN IEFVHVFNAG RSDIKGLEVS
VEKDLGQQLT LNGAASVTVG KYKDFVTGDG RDMSGEDFLY SPKYKMSLGA TYRWNERLTL
NTDLVYQSTS PSEYEFDDAG QVTDERRSDN YWLVNFNTEY KITRNIAVSG FVKNAFDKEY
ITNNRSGDIL DVGAPRTVGL ALRYDL
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