| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2738 |
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| Symbol | dnaE2 |
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| ID | 5870526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3069053 |
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| End bp | 3072133 |
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| Gene Length | 3081 bp |
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| Protein Length | 1026 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641547859 |
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| Product | error-prone DNA polymerase |
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| Protein accession | YP_001668971 |
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| Protein GI | 167033740 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.201336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACGC CGGGTTATGC CGAGCTGCAT TGCCTGTCCA ACTTCAGCTT CCAGCGCGGT
GCGTCGAGTG CCGATGAGCT GTTCCGGCGC GCGCGCGAAC AAGGCTACCA GGCCTTGGCG
ATTACTGACG AATGCACGTT GGCCGGTATC GTGCGCGCCT GGCAGGCCGC CAAGGCGCAT
CAGCTGCGGC TCATCGTCGG CAGCGAGGTG CAGTTGCACG ACGGGCCCAA GCTGGTGCTG
TTGGTCGAGA ACCTGACCGG CTACCAGAAC CTGTGCGCAC TGATCACCCG TGCCCGGCGG
CGGGCAGAGA AGGGTGAGTA CCAGTTGTTT CGTGACGACC TGCAGCAGCA CCATCAAGGC
CTGCTGGCCT TGTGGGTGGC CGACGACAGT GTTGATAAAG CCACCGGTGA ATGGCTGCGC
AGTGTATTCG CCGAGCGTCT GTGGCTGGCC GTGCACCTGC ACCGGGGCTG TGACGATGCC
ATGCGCCTGC AGCGCCTGCA GGCACTGGCG GCTGATGTGG GCGTGCGCGC CGTGGCCTGT
GGCGACGTAC ATATGCATGT GCGAGGCCGC CGTGCCTTGC AGGACTGCAT GACTGCCATC
CGCCAGCATT GCCAGGTAAA CGAGGCCGGG CGCTTTCTGT TTGCCAACGG CGAGCGGCAC
CTGCGCAGCC AAGCGCAACT GGGGGAACTG TACCCGGCCA ACTTGCTGGC AGAGACCTTG
ACCATTGCCC AGCGCTGTCA ATTCGACCTC AGCGAATTGA AATACCAGTA CCCGTGCGAA
CTGGTGCCCG AGGGCCACAC CCCGGCCAGC TGGTTGCGTG ATCTGTGCGA GCAGGGCTTG
CCGTTGCGCT GGCCAAACGG GCCAAGTGAA AAGGTGCGCG ATGTGCTGGC CAAGGAACTG
GCGTTGATCG AAGAGCTTGG TTACGAAAGC TATTTCTTGA CCGTGCACGA CATTGTCGCT
TTCGCCCGCA GCCAGCGCAT TCTGTGCCAG GGCCGTGGCT CGGCAGCCAA CTCGGTAGTG
TGTTTCGTGC TGGGCATCAC CGAACTCGAC CCTATGGAGC ATCACCTGCT GTTCGAGCGA
TTTCTGTCTC GCGAACGCAA CGAGCCGCCC GATATCGATG TGGATTTCGA GCATGACCGA
CGCGAAGAAG TGATCCAGTA CGTGTTCCGC CGCTATGGCC GGCACCGTGC AGCACTGACG
GCGGTGGTCA ACACCTATCA TGCCGCCGGA GCTGTGCGGG ATGTGGCGAG GGTGCTGGGG
CTGCCTGCCG ACCAGGTGGA TGCATTGGCC AAGTGCTGTG GCCGCTGGAG CGACCGTATA
CCCGATGAGC AGCGCCTGGC CGAGGCCGGT TTCGAGGCCG GCAGCCCTTC GCTGCGGCGG
GTGCTGGTAC TTGCTGGTGA ACTGATCGGC TTCCCCCGGC ACCTGTCGCA ACACCCAGGT
GGCTTCGTCA TCTCCCAGCA ACCGCTCGAC CAGTTGGTGC CAGTGGAGAA TGCGGCCATG
GCGCAGCGTA CGGTGATCCA GTGGGACAAG GACGACCTGG ACATGGTCGG CTTGCTCAAG
GTCGACGTGC TGGCGCTGGG CATGCTCAGT GCCTTGCGCC GTTGCTTCGA CCTGCTGCAG
CGCCACCGTG GCCGGCAGCT GACCCTGGCG ACCATCCCCA GCGAAGACCC AGCCACCTAC
GCCATGATCA GCCGCGCCGA GACCATGGGT GTGTTCCAGA TCGAGTCACG CGCGCAAATG
GCCATGTTGC CCAGGCTGCG GCCCACCACG TTCTACGATC TGGTCATCGA AGTGGCCATC
GTCCGCCCCG GTCCGATCCA GGGCGACATG GTTCATCCGT ACCTGCGCCG GCGCCTGAAA
CAGGAGCCGG TGACGTACCC GTCCGCGCAA CTCAAGGCAG TCTTCGAACG TACGTTGGGT
GTACCGCTAT TCCAGGAGCA GGTGATGGAA CTGGCCATGG TCGCAGCCGA CTATACGCCG
GGCGAGGCTG ACCAGTTGCG CCGCAGCATG GCGGCCTGGA AGCGCCATGG TGGCCTGGAG
CCGCACCGCG AGCGGCTGGT ACAGGGCATG CTGCGCAACG GTTACGAGCT GGCGTTTGCC
CAGCGCATCT TCGAGCAAAT CAAGGGCTTT GGCAGCTATG GCTTCCCTGA ATCGCATGCG
GCCAGTTTTG CCCTGCTGTG CTACGCCAGC AGTTGGTTGA AGTGCCATGA GCCGGCGATC
TTCACGTGTG CGTTGGTCAA CAGCTGGCCG ATGGGCTTCT ACAGCCCTGA CCAGTTGCTG
CAGGAGGCTC GCCGCCAGGG TATCGAGGTG CGGCCCGTAG ACGTTTGCCA CAGTGAATGG
GACTGTACCC TCGAGCCTGA TGAGCATGGC ACATTGGCCA TTCGCATGGG CTTGCGCCTT
GTGCGTGGCC TGGCCGAAGC CGATGCCAGG CGTTTGCAGC AGGCAAGGGC GCAACGGCCA
TGGCGCGACG TCGAAGACCT GTGCCTGCGT GCCGGGCTCG ACTCACGGGC CCGAGCCCGC
CTGGCCGATG CCGGAGCGCT GCGGGCCTTG GCCAGCGATC GGCATCAGGC ACGCTGGCAG
GTGGCAGCGG TGCAGCCGCA GCTGCCGTTG TTCGCCGACG TGCAAGCCTT GCCGGAAGTG
GCGGTGGCTT TGCCTGCACC TACCGTGGAC GAGGACCTGG TAGCCGATTA TCAAACCCTC
GGTACTACGC TTGGCCCGCA TCCACTGGCC CTGCTGCGCT CACGCCTGAG GGCGCTGGGG
TGTCGTAGCT CGAGTGAGCT GCAAGGTGTC GAGCATGGCG ACACCATTGC CGTGGCCGGG
CTGGTAGTAG GCCGCCAACG GCCCCAGACC GCGAGTGGAG TGACCTTCGT TACCCTGGAG
GATGAGCACG GGATGGTCAA CGTGGTGGTG TGGCGGGACA TTGCCGAACG GCAGCGGCGG
GCCTTGGTGG GGTCTCAGCT GCTCAAGGTC AGTGGGCGGC TGGAGCAGGA GAATGGTGTG
CGGCACTTGA TTGCACGGCG GCTGGAGGAT GTGAGCCCGC TGTTGCAAGG GCTGGATGTG
CGTAGCCGGG ATTTTCATTA A
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| Protein sequence | MNTPGYAELH CLSNFSFQRG ASSADELFRR AREQGYQALA ITDECTLAGI VRAWQAAKAH
QLRLIVGSEV QLHDGPKLVL LVENLTGYQN LCALITRARR RAEKGEYQLF RDDLQQHHQG
LLALWVADDS VDKATGEWLR SVFAERLWLA VHLHRGCDDA MRLQRLQALA ADVGVRAVAC
GDVHMHVRGR RALQDCMTAI RQHCQVNEAG RFLFANGERH LRSQAQLGEL YPANLLAETL
TIAQRCQFDL SELKYQYPCE LVPEGHTPAS WLRDLCEQGL PLRWPNGPSE KVRDVLAKEL
ALIEELGYES YFLTVHDIVA FARSQRILCQ GRGSAANSVV CFVLGITELD PMEHHLLFER
FLSRERNEPP DIDVDFEHDR REEVIQYVFR RYGRHRAALT AVVNTYHAAG AVRDVARVLG
LPADQVDALA KCCGRWSDRI PDEQRLAEAG FEAGSPSLRR VLVLAGELIG FPRHLSQHPG
GFVISQQPLD QLVPVENAAM AQRTVIQWDK DDLDMVGLLK VDVLALGMLS ALRRCFDLLQ
RHRGRQLTLA TIPSEDPATY AMISRAETMG VFQIESRAQM AMLPRLRPTT FYDLVIEVAI
VRPGPIQGDM VHPYLRRRLK QEPVTYPSAQ LKAVFERTLG VPLFQEQVME LAMVAADYTP
GEADQLRRSM AAWKRHGGLE PHRERLVQGM LRNGYELAFA QRIFEQIKGF GSYGFPESHA
ASFALLCYAS SWLKCHEPAI FTCALVNSWP MGFYSPDQLL QEARRQGIEV RPVDVCHSEW
DCTLEPDEHG TLAIRMGLRL VRGLAEADAR RLQQARAQRP WRDVEDLCLR AGLDSRARAR
LADAGALRAL ASDRHQARWQ VAAVQPQLPL FADVQALPEV AVALPAPTVD EDLVADYQTL
GTTLGPHPLA LLRSRLRALG CRSSSELQGV EHGDTIAVAG LVVGRQRPQT ASGVTFVTLE
DEHGMVNVVV WRDIAERQRR ALVGSQLLKV SGRLEQENGV RHLIARRLED VSPLLQGLDV
RSRDFH
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