| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2733 |
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| Symbol | |
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| ID | 5870521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3064179 |
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| End bp | 3065597 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641547854 |
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| Product | short chain fatty acid transporter |
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| Protein accession | YP_001668966 |
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| Protein GI | 167033735 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2031] Short chain fatty acids transporter |
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| TIGRFAM ID | [TIGR00366] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGCTG AAATTCAAGA CAGCCGTTCC GCGCGCTTTG CCTTGCGCTG CTCCAACTGG
GCCGAACGCT GGTTCCCCGA TTCCTGGGTG TTCGCCGCCT TGGCGGTGCT GCTGGTGTGC
ATTGGCGCAC TGGCCATGGG GGCCAAGCCG ACCGACACCG CCAAAGCGTT TGGCGACGGT
TTCTGGAGCT TGATCCCGTT CACCATGCAG ATGGCCTTCG TGGTCATTGG TGGCTATGTG
GTTGCCAGTT CGCCGCCCGC CGCGCGTCTG ATCGATCGCC TGGCGCGCAT CCCCGGCAAC
GGTCGCTCGG CCGTGTGCTG GGTAGCGCTG ATATCGATGC TGGCCTCCTT GCTCAACTGG
GGCCTGTCGC TGGTGTTCGG TGGTTTGCTG GTACGCGCCC TGGCGCGGCG CACCGACCTG
AAAATGGACT ACCGCGCCGC CGGTGCGGCT GCCTACCTGG GCTTGGGCGC GGTGTGGGCG
CTGGGCCTGT CATCGTCGGC GGCGCAGCTA CAAGCCAACC CGGCCAGCCT GCCACCCTCG
ATCCTGTCGA TTACTGGGGT GATCCCGTTC ACCGAAACCA TTTTCCTCTG GCAGTCCGGC
GTGATGTTGG CGGCGCTGGT GGTGGTCTCG CTGGTGATCG CCTACGCCAC CGCCCCGGGC
CCGAACAGTG CACGCAGCGC TGAAGACTGT GGTGTCGACC CCACCTTCAC GGCGCCGCCC
GCACCGCAAC GTACCCGCCC AGGTGAGTGG CTGGAGCACA GCCCCATCCT GATTCTGCTG
CTGGTGGCCC TGGCCGCTGG CTGGCTGTAC CAGGAGTTCG CCACCAAGCC GGCGATTACC
GCTATCTCCG GGCTGAACAC CTACAACCTG TTGTTCATCA TGCTCGGTGC CTTGCTGCAC
TGGCGCCCGC GCAGTTTCCT TGACGCGGTG GCGCGTGCCG TGCCGACCAC CACGGGGGTG
CTGATCCAGT TCCCGCTGTA CGGTTCGATC GCCGCCATCC TCACCCAGGT GAAGGGTGTC
GACGAACAGA CCCTGGCCCA CCATATTTCG TTGTTCTTCA CCCAGATTGC CACCCATGAC
ACCTATGCCG TGCTGATGGG GGTGTATTCG GCGGTGCTGG GCTTCTTCAT CCCCTCGGGC
GGTGGCAAGT GGATCATCGA GGCCCCCTAC GTGATGCTGG TGGCGAATGA CCTGCAGTAC
CACCTGGGCT GGGCGGTGCA GATCTACAAC GCTGCCGAAG CTTTGCCGAA CCTGATCAAC
CCGTTCTACA TGCTGCCGCT GCTGGGCGTA CTGGGGCTCA AGGCGCGCGA CCTGATCGGC
TTCTCGTTCG TGCAGTTGCT GGTGCATGTG CCGTTGGTGC TGGTGTTGCT GTGGGCACTG
GGTACGACGT TGCAGTACGT ACCGCCAGTG ATGCCTTGA
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| Protein sequence | MAAEIQDSRS ARFALRCSNW AERWFPDSWV FAALAVLLVC IGALAMGAKP TDTAKAFGDG
FWSLIPFTMQ MAFVVIGGYV VASSPPAARL IDRLARIPGN GRSAVCWVAL ISMLASLLNW
GLSLVFGGLL VRALARRTDL KMDYRAAGAA AYLGLGAVWA LGLSSSAAQL QANPASLPPS
ILSITGVIPF TETIFLWQSG VMLAALVVVS LVIAYATAPG PNSARSAEDC GVDPTFTAPP
APQRTRPGEW LEHSPILILL LVALAAGWLY QEFATKPAIT AISGLNTYNL LFIMLGALLH
WRPRSFLDAV ARAVPTTTGV LIQFPLYGSI AAILTQVKGV DEQTLAHHIS LFFTQIATHD
TYAVLMGVYS AVLGFFIPSG GGKWIIEAPY VMLVANDLQY HLGWAVQIYN AAEALPNLIN
PFYMLPLLGV LGLKARDLIG FSFVQLLVHV PLVLVLLWAL GTTLQYVPPV MP
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